Gene Ava_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1335 
Symbol 
ID3682922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1646343 
End bp1646990 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content43% 
IMG OID637716673 
Productphospholipase D/transphosphatidylase 
Protein accessionYP_321854 
Protein GI75907558 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.602811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.886104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTTG AAGCATATCA TAAGCTAAAA GTTTATTTTA TGATTCAAAT CACAGCAGCA 
GAACGAAGCA CATCTCAACA AATACGCGAT CGCATTGAGT TAGTATGGAC TGGCCCAGAG
GTGACTGCTT CTCAAAGCCG TGATACTAGC GTTGTTGTCC GCGAACTGTT TAGCAACGCG
AAAAAAACTG TTCTCATCTC CAGCTTTGCC ATTGATAAAG GCGAGAAAGC AAAAAAATTA
TTCCAGGTAC TTGCAGAACT TATGGATGCT AACCCAGAAC TATATGTGCA AATGTTTCTT
AACATCCAAC GTCCACATCA TAGTGAAGTA TCAGAGTCAG TATTATTGAG GGAATTTGCA
CACACCTTTC GCCGTGATAT CTGGGTAGGG GAGAGATTAC CAGAAGTCTA TTATGATGTG
CGATCGCTGG CGGTTGATAT TAAACAAAAA TCATCTCTCC ATGCCAAGTG CATTGTTGTA
GATGAGGAAT TTGTGCTGAT CACATCAGCT AACTTTACAG AAGCCGCCCA CGAACGCAAT
ATTGAAGCAG GCGTGTTGCT CACTGACTCA GCAACAGCCC AAGCATTGCG ATCTCAGTTT
GACACTTTGG TGTCTCACAA AATCCTGCGT CCTATTCCTG GGATTTGA
 
Protein sequence
MLFEAYHKLK VYFMIQITAA ERSTSQQIRD RIELVWTGPE VTASQSRDTS VVVRELFSNA 
KKTVLISSFA IDKGEKAKKL FQVLAELMDA NPELYVQMFL NIQRPHHSEV SESVLLREFA
HTFRRDIWVG ERLPEVYYDV RSLAVDIKQK SSLHAKCIVV DEEFVLITSA NFTEAAHERN
IEAGVLLTDS ATAQALRSQF DTLVSHKILR PIPGI