Gene Ava_1328 details

Gene Information

• Locus tag: Ava_1328
• ID: 3682974
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anabaena variabilis ATCC 29413
• Kingdom: Bacteria
• Replicon accession: NC_007413
• Strand: +
• Start bp: 1634348
• End bp: 1637827
• Gene Length: 3480 bp
• Protein Length: 1159 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637716666
• Product: helicase-like
• Protein accession: YP_321847
• Protein GI: 75907551

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATAAATA AAACAATATC TCTAACCTCA GCCGAAGTGC GATCGCGTCT CATCGAAGCC 
TTACAACTCG ACCTTATAGG CCCCACCCCT GATGATATTG ACCACGCAGA AGAAATTCTC 
GACCAAGCAC CATCAAAATG GTATCTTACG GGTTTTCTTG TTCCGCATGG CGCACCCATC 
GAACAGCGTG GAGATGATAC TGGTGATGAT GATTTAGACG TAATACAAGG CGGTAGCGCG 
GGAGAAGATG AAGCTGTCCC AGACAAACCA TTCGCCAAGA AAGCTTTTTT CCCTTCATCG 
ATGGGTTTAA GTTTTCTGGT TGCTGAAAAC GCCAGTCAAC TTAATCTCAC AGTGCAATGG 
GGTGATTACT TCCCAATAAA AGATAATACT GCTGCACAAT CTCAAGATGA TTCTGGTGCG 
GAAGAAATTT TCTCACCCCT GGAACTAGAA ACTACTAACC CCCAAGAGGA AGCAAATAAC 
AATTTATCGG GATGCTGGAA GCGGATTCCA CGCCAAACCC AAATCACTGT TCCTTTAAAA 
TTACCGCTTC ATCAAAGCCA ATCTACAAAA ACTATTCCTA TAGCTGATAG CAACGGTTTA 
CAAATCGTCG TCTCCATCCG TCCTGTAACA TCCAAAGAAC TTGTCCCGGC TGGAACTCGT 
TCTGTTTCTG TATTTCTAGT CAATAATCGC CTCTCTACCT CAGATAAACA GCTCGATATT 
AGCTATATTT TTCAAACCAG TTTAATCATC CATACCCCAG AACCATTAGT AGCCCGTCCC 
AACTTACGCG GACGAGATAA TCATGATTGG GATGAAAACG TCGCAGATTT ACAATACCGC 
GATGATTACG AATATGCAGT AGGTCATAAC GTTAGTGCGA TCGCACTTAC CAATCCCGAT 
GGTAGCTGTC AGGAAATACG TACAGCATGG ATACCAACGG CTGATGTGGA AAAGGTGATA 
GCCGCCCAAG TAAAAGACGT GGAATTGGGA ATGGAAGCCT TAGCCAACGC ACCCACACCA 
GCAGCATTGC AAAATATGCT GAGTCCAATG GTAGATGCTT ACACTGATTG GATTAAGGAA 
CAACACACCA AATGTCCCAC CGAACCCAAG CGCTTAAATG TCGCCCTAGA TTTACTCCAC 
CGTGCGGAAA TTGCTAACAA GCGCATCAAC GCAGGTATCC AAGCCTTAAA TGACCCACAA 
ATATTTGAGG CTTTCTGCAT CGCTAATCGC GCCATTGCTA CAGCCATTCG CCAACGTACT 
ACTCACGGTA AAACTACCAC GCCGGAAACA GTAGCACCAC CAAAATGGCG ACCCTTCCAG 
TTAGCATTTT TACTGATGAA CTTGGTAGGG ATAGCTTACC CCGAAAATGG CGATCGTGAA 
TTAGTCGATT TGCTATTCTT CCCCACAGGT GGCGGTAAAA CCGAAGCCTA CTTAGGACTC 
GCAGCCTTTA CCCTGGTCTT GCGGCGACTG CGTTATCCTG GTGTCAAATC GGCTGGGTTA 
AGCGTCCTCA TGCGCTATAC CCTGCGGCTT TTGACCCTCG ACCAACTCGG AAGGGCGGCA 
GCGATGATTT GCGCCTTAGA ATTGGAACGT CAAAAAAACC CGCAGAAGTT GGGAACTTGG 
CCGTTTGAAA TTGGGCTATG GGTAGGACAA ACCGCAACAC CCAACCGCAT GGGTAAAAAA 
GGAGATAACG ACGAAAACAG TGCTAGAGAA CGTACTCGTG CTTTTCAAAA TAACGATCGC 
AATCCCTCAC CTATTCCCTT AGAAAATTGT CCTTGGTGTG GGACAAAATT TAATCGCAAC 
TCATTCCAAT TACAGCCAAA TCCCGACCAA CCAACCAATT TACAAGTATT TTGTGCTAAC 
CGTCGCTGTA ATTTCCGTGG TGACAATCCT TTACCAATAG TCACCGTAGA CGAGCCACTA 
TACGGCCGTC TACCTTGTTT TATTATCTCT ACAGTAGATA AATTCGCTAC CCTGCCTTGG 
GTGGGAGAAA CTGGTGCATT ATTTGGACGA GTAGACCGCT ACGACAATGA TGGTTTTTAC 
GGCCCCACTA AACTAAATCG CGGTAAACCC CTTGGCGGCT ATTTACCACC ACCAGACCTA 
ATTATCCAAG ACGAATTACA TTTAATTTCC GGCCCCTTGG GAACAATGGT AGGTCTATAT 
GAAACAGCCA TTGATGCTTT GTGTAGTCAA GAAATAGACG GTAAAACAAT TCGTCCGAAA 
ATAGTTGCTT CCACTGCGAC AGTCCGCCGC GCCAGCAAAC AAATTCAAGC TTTATTCGGT 
CGCAGCGAAG TTGATATATT TCCACCACCA GGGCCAGACA GACGCGATTC ATTCTTTGCT 
AAAACCGTCC CCGCCACAGT CAAAAACGCC CGTACTTATG TAGGAATTGC TGCTCAAGGA 
CGCAGTTTAA AGGTAGTTTT ATTGCGTAGC TATTTAGCAT TGTTAGGCGC AGCCCAAAAG 
CACTGGCTAG AACAAGGGGG TAAGAAGAAC TCTGATAACC CAGCCGACCC TTATATGACG 
CTGTTAGGTT ACTTTAACTC CCTACGTGAA CTAGGTGGTA GTCGGCGCAT TGTAGAAGAT 
GAAGTCAAAT CTCGTCTATT ACGTTACAGC CAGCATCAGC GAGTTGACGA AACTTCAGGG 
TTATTTGCTG ACCGGAAAAT TGATGATGAA CCAGAAGAAC TAACCTCCCG TGTCAGCACT 
AGCGACGTTG CAGATACTAA ACGGCGAATG GAATTAACCT TTGATCAAGA GGACAAGGTT 
GATGTAGTTT TAGCAACTAA TATGATTTCC GTAGGTTTGG ATATTACCCG CTTGGGTTTA 
ATGGTAGTTC TCGGTCAACC CAAGACAGCC GCCGAATATA TCCAAGCTAC CAGCCGTGTA 
GGACGGGATG AGGAACGGCC GGGTTTAGTA GTGACCTTGT TGAACATTCA TCGTCCACGC 
GATCGCTCTC ATTATGAACG CTTTTTTGCT TGGCATTCAA CATTTTACCG AGCAGTAGAA 
GCTACCAGCG TAACGCCCTT TTCTCCCCGC GCTATTGACC GAGGTATTGC CGCCATCACC 
GTTGCTTTGG CACGGCTAGG ACATCCAGGA ATGACAGCAC CAACTCGCGC TTTCGATATT 
ACCCAACATC GCCAAGAACT AGAGTTTGTT GTGGAAACCA TTGCACAAAG GGCAGAAATG 
CACGATAAGG AACTGGATGC AAATGAAGCC GAAGCACTAC GCCATAAAGT GAAAAATCAA 
GTCATAGATT TACTCGATGA TTGGACAAGT ATCGCCAATG GAAAAATTAG CCTGCAATAT 
CAACGGGAAG TAGGCGAAGC ACCACCACTA ATATTTGACC CCCTCGACCC CGAATTAAGG 
AATCAACCAC AAAAAGCACA AAGGTTTAAA GCACAGCGAA GTTTGCGTGA TGTCGAACCA 
ACAGTCAATC TCTGGGTAAT TAATCCTTAC GGACATGAGG TAGAGGAGAA AGGAAAATGA 

 

Protein sequence

MINKTISLTS AEVRSRLIEA LQLDLIGPTP DDIDHAEEIL DQAPSKWYLT GFLVPHGAPI 
EQRGDDTGDD DLDVIQGGSA GEDEAVPDKP FAKKAFFPSS MGLSFLVAEN ASQLNLTVQW 
GDYFPIKDNT AAQSQDDSGA EEIFSPLELE TTNPQEEANN NLSGCWKRIP RQTQITVPLK 
LPLHQSQSTK TIPIADSNGL QIVVSIRPVT SKELVPAGTR SVSVFLVNNR LSTSDKQLDI 
SYIFQTSLII HTPEPLVARP NLRGRDNHDW DENVADLQYR DDYEYAVGHN VSAIALTNPD 
GSCQEIRTAW IPTADVEKVI AAQVKDVELG MEALANAPTP AALQNMLSPM VDAYTDWIKE 
QHTKCPTEPK RLNVALDLLH RAEIANKRIN AGIQALNDPQ IFEAFCIANR AIATAIRQRT 
THGKTTTPET VAPPKWRPFQ LAFLLMNLVG IAYPENGDRE LVDLLFFPTG GGKTEAYLGL 
AAFTLVLRRL RYPGVKSAGL SVLMRYTLRL LTLDQLGRAA AMICALELER QKNPQKLGTW 
PFEIGLWVGQ TATPNRMGKK GDNDENSARE RTRAFQNNDR NPSPIPLENC PWCGTKFNRN 
SFQLQPNPDQ PTNLQVFCAN RRCNFRGDNP LPIVTVDEPL YGRLPCFIIS TVDKFATLPW 
VGETGALFGR VDRYDNDGFY GPTKLNRGKP LGGYLPPPDL IIQDELHLIS GPLGTMVGLY 
ETAIDALCSQ EIDGKTIRPK IVASTATVRR ASKQIQALFG RSEVDIFPPP GPDRRDSFFA 
KTVPATVKNA RTYVGIAAQG RSLKVVLLRS YLALLGAAQK HWLEQGGKKN SDNPADPYMT 
LLGYFNSLRE LGGSRRIVED EVKSRLLRYS QHQRVDETSG LFADRKIDDE PEELTSRVST 
SDVADTKRRM ELTFDQEDKV DVVLATNMIS VGLDITRLGL MVVLGQPKTA AEYIQATSRV 
GRDEERPGLV VTLLNIHRPR DRSHYERFFA WHSTFYRAVE ATSVTPFSPR AIDRGIAAIT 
VALARLGHPG MTAPTRAFDI TQHRQELEFV VETIAQRAEM HDKELDANEA EALRHKVKNQ 
VIDLLDDWTS IANGKISLQY QREVGEAPPL IFDPLDPELR NQPQKAQRFK AQRSLRDVEP 
TVNLWVINPY GHEVEEKGK