Gene Ava_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1317 
Symbol 
ID3682963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1617235 
End bp1617657 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content43% 
IMG OID637716655 
Producthypothetical protein 
Protein accessionYP_321836 
Protein GI75907540 
COG category[S] Function unknown 
COG ID[COG4270] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000855908 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCTG TAATTGACCA AGGATATCAT CGCCAAGAAT TATTCCGTGG TATTTTAGCG 
GTAGCTATCA TCATCGTCGG CATCACGCAT TTTTTGAGAC CAGAGCAGTA TGCTCGGATT
GTACCACCAC CATTTCCGCC ATTTACATCA GTCTACGTTA GCGGGTTTTT TGAAATTCTC
GGTGGTATCG GCTTAATGAT TCCATTTGTC AGCGTCGCCG CAGCATGGGG ATTGATCTCC
TTATTTATTG CTGTGTTTCC TGCCAATATT TATATGACGC TACATAACAT TCCCATTGAT
GGCATTCCGC ATAATCAATT ACTCTATTTG GCAAGATTAC CATTTCAGGC TGTGTTAATT
GCCTGGGCAT ACTTGTATAC TCACAGGTCA ACCCCGGAGG GGAATTCAAA AACGATGAGT
TAG
 
Protein sequence
MSSVIDQGYH RQELFRGILA VAIIIVGITH FLRPEQYARI VPPPFPPFTS VYVSGFFEIL 
GGIGLMIPFV SVAAAWGLIS LFIAVFPANI YMTLHNIPID GIPHNQLLYL ARLPFQAVLI
AWAYLYTHRS TPEGNSKTMS