Gene Ava_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1298 
Symbol 
ID3683041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1597414 
End bp1598610 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content32% 
IMG OID637716636 
Producthypothetical protein 
Protein accessionYP_321817 
Protein GI75907521 
COG category[S] Function unknown 
COG ID[COG5542] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.664449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.72788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTTA TGACAAATAC TTCAGATAAG AGATTATTTA AACTAATTAA ATATAAATCT 
AAAACGTTAT TAAAAATATT TCCTCACCAA GTTCCCAATT ATTTAACTAT TGCTATTATC
TGCGCTGTCC TCATTCGGTT AATTTGTGTT CCTAATAAAT CCTCTGACTA TACTTCTTTT
CTAGCCCCTT GGTATGATTT TATAGCCACT AATGGTGGGT TTAGTGCCTT AAAACATGGT
TTTGCTGACT ATACACCTCC CTACCTCTAC TGGCTTGTAT TTGCAGCCAC TCTACTTTCA
GGATTGCCCA AAATATTTTC AATTAAGCTT TTCGCTATGG CTGTTGATTT TGTTTGTGCT
TTCTTCACTT ACAAAATTGT TAAACTTAAA TATCCACAAG GTAGACAACC AATTTTTGCT
TTTATAACAG TTATATTAAG TCCTGTAGCT ATCTATAACA GCGCCATTTG GGGACAGTGT
GACGGCATAT ATACAACAGG ATTAATTGCC TGTATTTATT TTTTATGTAT AAAGAAAGAA
ATTCCGGCAT TGGTGAGTTT TGGGATTGGA CTTTCCTTTA AACTACAAGC AATGTTTCTT
TCTCCCTTAC TATTAATAAT GTTGCTTAAG CAAAGAATAC GTTGGTACTA TATACCAATC
ATTCCTTTAG TATATTTATT AGCAATATTG CCCGCTTGGT TTGCTGGAAG ACCGATGTCG
GAACTATTAT TGGTATATTT TAATCAAGCT AATAAATACA AACAATTAGC TAAAGCTGTC
CCTAATCTTT ATCAATGGAT TCCTAATGAT TTATATAATA TAGTTGTTCC CATAGGCTTA
ATATCAACTA TATTTGCAGT AATTTTATTA GCTTATGTTG TAAATAAAAG TAAATTAGAA
ATTACGCAAG AAAGATTGAT ACATTTAGCA ACAATATCAG TTTTATTAAT GCCTTATATA
CTGCCAAAAA TGCACCAGCG ATATTTTTAT CCGGCTGATA TTTGTTCTAT TATTTTAGCT
TTTTATTTGC CACAATACCG TTGGGTAGCA ATAGCAGTAC AGTTATCATC ACTTTTCAGT
TACTTGGGAA CTCCTATACA TATCAAGTTT TTCTCTATTG TTTTGGGTTA TGTACTTTGG
TTTGTGATCC GCAAGTCTGA TTTGATTTTT CCCAAATTAA ATACTGCATT GCGGTAG
 
Protein sequence
MPVMTNTSDK RLFKLIKYKS KTLLKIFPHQ VPNYLTIAII CAVLIRLICV PNKSSDYTSF 
LAPWYDFIAT NGGFSALKHG FADYTPPYLY WLVFAATLLS GLPKIFSIKL FAMAVDFVCA
FFTYKIVKLK YPQGRQPIFA FITVILSPVA IYNSAIWGQC DGIYTTGLIA CIYFLCIKKE
IPALVSFGIG LSFKLQAMFL SPLLLIMLLK QRIRWYYIPI IPLVYLLAIL PAWFAGRPMS
ELLLVYFNQA NKYKQLAKAV PNLYQWIPND LYNIVVPIGL ISTIFAVILL AYVVNKSKLE
ITQERLIHLA TISVLLMPYI LPKMHQRYFY PADICSIILA FYLPQYRWVA IAVQLSSLFS
YLGTPIHIKF FSIVLGYVLW FVIRKSDLIF PKLNTALR