Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1298 |
Symbol | |
ID | 3683041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1597414 |
End bp | 1598610 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637716636 |
Product | hypothetical protein |
Protein accession | YP_321817 |
Protein GI | 75907521 |
COG category | [S] Function unknown |
COG ID | [COG5542] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.664449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.72788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGTTA TGACAAATAC TTCAGATAAG AGATTATTTA AACTAATTAA ATATAAATCT AAAACGTTAT TAAAAATATT TCCTCACCAA GTTCCCAATT ATTTAACTAT TGCTATTATC TGCGCTGTCC TCATTCGGTT AATTTGTGTT CCTAATAAAT CCTCTGACTA TACTTCTTTT CTAGCCCCTT GGTATGATTT TATAGCCACT AATGGTGGGT TTAGTGCCTT AAAACATGGT TTTGCTGACT ATACACCTCC CTACCTCTAC TGGCTTGTAT TTGCAGCCAC TCTACTTTCA GGATTGCCCA AAATATTTTC AATTAAGCTT TTCGCTATGG CTGTTGATTT TGTTTGTGCT TTCTTCACTT ACAAAATTGT TAAACTTAAA TATCCACAAG GTAGACAACC AATTTTTGCT TTTATAACAG TTATATTAAG TCCTGTAGCT ATCTATAACA GCGCCATTTG GGGACAGTGT GACGGCATAT ATACAACAGG ATTAATTGCC TGTATTTATT TTTTATGTAT AAAGAAAGAA ATTCCGGCAT TGGTGAGTTT TGGGATTGGA CTTTCCTTTA AACTACAAGC AATGTTTCTT TCTCCCTTAC TATTAATAAT GTTGCTTAAG CAAAGAATAC GTTGGTACTA TATACCAATC ATTCCTTTAG TATATTTATT AGCAATATTG CCCGCTTGGT TTGCTGGAAG ACCGATGTCG GAACTATTAT TGGTATATTT TAATCAAGCT AATAAATACA AACAATTAGC TAAAGCTGTC CCTAATCTTT ATCAATGGAT TCCTAATGAT TTATATAATA TAGTTGTTCC CATAGGCTTA ATATCAACTA TATTTGCAGT AATTTTATTA GCTTATGTTG TAAATAAAAG TAAATTAGAA ATTACGCAAG AAAGATTGAT ACATTTAGCA ACAATATCAG TTTTATTAAT GCCTTATATA CTGCCAAAAA TGCACCAGCG ATATTTTTAT CCGGCTGATA TTTGTTCTAT TATTTTAGCT TTTTATTTGC CACAATACCG TTGGGTAGCA ATAGCAGTAC AGTTATCATC ACTTTTCAGT TACTTGGGAA CTCCTATACA TATCAAGTTT TTCTCTATTG TTTTGGGTTA TGTACTTTGG TTTGTGATCC GCAAGTCTGA TTTGATTTTT CCCAAATTAA ATACTGCATT GCGGTAG
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Protein sequence | MPVMTNTSDK RLFKLIKYKS KTLLKIFPHQ VPNYLTIAII CAVLIRLICV PNKSSDYTSF LAPWYDFIAT NGGFSALKHG FADYTPPYLY WLVFAATLLS GLPKIFSIKL FAMAVDFVCA FFTYKIVKLK YPQGRQPIFA FITVILSPVA IYNSAIWGQC DGIYTTGLIA CIYFLCIKKE IPALVSFGIG LSFKLQAMFL SPLLLIMLLK QRIRWYYIPI IPLVYLLAIL PAWFAGRPMS ELLLVYFNQA NKYKQLAKAV PNLYQWIPND LYNIVVPIGL ISTIFAVILL AYVVNKSKLE ITQERLIHLA TISVLLMPYI LPKMHQRYFY PADICSIILA FYLPQYRWVA IAVQLSSLFS YLGTPIHIKF FSIVLGYVLW FVIRKSDLIF PKLNTALR
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