Gene Ava_1267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1267 
SymbolmraY 
ID3683166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1557424 
End bp1558527 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content46% 
IMG OID637716605 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_321786 
Protein GI75907490 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.401838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGCTA AATTATCGCC TAATCAAGGA TTAAATATTT CTGGTATTGG TCTAGCTTCT 
TCCTTAGCCG CCGGGCTAGG CATAGCAGCT TTAACTTTGG ATTGGATAGC AAACAGAAAT
CCCTGGCAAG GTACATCGCT TACCTTGCCC TTGTTGCTAT GTACTATTGC TTCAGCTATT
GCAGGTTACT TTGTCGTACC TCTACTGCAA GCACTGAAAA CTGGGCAAAT CATCCGTGAA
GATGGTCCTC AAGCCCATTT GAAAAAAGCC GGCACACCCA CAATGGGGGG GATATTTTTC
ATTCCTGTTG CCGTGGTAGG TGCTTGTGTA CTGTCTAACT TTGCCACAGA AGTACTTGCT
GTCTCGGCTC TCACCCTTAG CTATGGGCTA ATTGGTTGGA TTGACGATTG GCAAATTCTG
CGCCGCAAGT CTAATAAGGG TATATCCCCA CGGATGAAAT TGGCTTTGCA AATCTGTTTT
GCAGCAGCCT TTTGTTTATG GTTAATGTTT AATCAACCCG CTAATATTAC GAGTATTGCT
TTACCCTGGG TAAGCTTTGC CCTACCTTTG GGATTTTTAT TCTGGCCTTT GGCTGGCTTT
GTCCTAGTGG CAGAGAGTAA TGCAACTAAT TTAACTGATG GTATTGATGG CTTGGCTGGA
GGAACTGTAG CGATCGCCTT ACTCGCATTA GGTGCTATAG TTGCCCCAAC ATCCCCCGCA
TTAATGGTTT TCTGTGCAGC TTTAAGTGGT AGTTGCTTAG GTTTCTTAGC TCACAACCGC
AACCCAGCTA GGGTATTTAT GGGTGATACA GGTTCCCTAG CACTGGGGGG TGCTTTAGCG
GCTGTAGCCT TACTAACTAA CAGTTTGGTA GCCTTGTTTA TCCTCAGTGG TATCTTCTTC
GTTGAAACCC TTTCTGTAAT GGCACAGGTA AGCTACTACA AAGCCACTAA AGGCCCTGAC
GGCAAAGGCA AGCGCCTCTT GAAAATGGCT CCTCTGCACC ACCATTTAGA ACTATCAGGC
TGGTCAGAAT TACAGGTAGT TAGCTCATTT TACGTGATAG CTACCATCTT AGCTGTTATC
TGTTTGGCGA TCGCGCCATT CTGA
 
Protein sequence
MDAKLSPNQG LNISGIGLAS SLAAGLGIAA LTLDWIANRN PWQGTSLTLP LLLCTIASAI 
AGYFVVPLLQ ALKTGQIIRE DGPQAHLKKA GTPTMGGIFF IPVAVVGACV LSNFATEVLA
VSALTLSYGL IGWIDDWQIL RRKSNKGISP RMKLALQICF AAAFCLWLMF NQPANITSIA
LPWVSFALPL GFLFWPLAGF VLVAESNATN LTDGIDGLAG GTVAIALLAL GAIVAPTSPA
LMVFCAALSG SCLGFLAHNR NPARVFMGDT GSLALGGALA AVALLTNSLV ALFILSGIFF
VETLSVMAQV SYYKATKGPD GKGKRLLKMA PLHHHLELSG WSELQVVSSF YVIATILAVI
CLAIAPF