Gene Ava_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1237 
Symbol 
ID3683175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1523621 
End bp1525039 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content44% 
IMG OID637716575 
Productbiopterin transport-related protein BT1 
Protein accessionYP_321756 
Protein GI75907460 
COG category 
COG ID 
TIGRFAM ID[TIGR00788] folate/biopterin transporter 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.122493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATTG ACTCCTCTGG CTTGTCCAAG GTCAAAGACT CAGTAAGAAA ACAAATTTTC 
TTCGGTAATG AACCTAGTGC CGAATTAATT GCCATCCTTA GCGTCTATTT TGTCCAAGGG
ATTTTAGGCC TGGCGCGTCT AGCCGTCAGC TTTTTTCTCA AAGATGAATT GTTGTTAAGT
CCTGTTCAGG TATCGGCATT AATGGGAATT GTGGCCTTAC CTTGGATGGT TAAGCCATTA
TTTGGCTTTG TTTCAGACGG CTTACCGATA TTCGGCTACC GTCGCCGACC ATACCTAGTG
TTATCAGGAA TACTGGGAGC AATTTCTTGG ATCAGTTTGG CCACAATAGT TCATACTAGC
TGGGCAGCTA CCGTAGCGAT CGCCCTTGGT TCTCTATCTG TCGCTGTGAG TGATGTGATA
GTTGACTCCC TGGTTGTGGA ACGCGCCAGA GAAGAATCAG TGTCTCATGT TGGCTCACTA
CAAGCATTAT GTTGGGGAGC TTCTGCCTTC GGTGGTTTAA TTACTGCCTA CTTTAGTGGG
TTGCTACTAG AGCATTTCAC TACTCGTACC GTATTTTTGA TTACAGCTTC ATTTCCTCTC
ATTGTCTCAG GGGTCGCGTG GTTGATTGCT GAGTCTCCTG TTAGTAAAGA CGGGAGTGAT
AATACTAACC TCCTCAGTGT CAAGCAGCAA CTACAGCAAC TACGCCAAGC ATTCACCCAA
AAAAGTATTT GGCTACCCAC TGCATTCGTA TTTATTTGGC AAGCCACCCC AACTGCTGAC
TCAGCCTTTT TCTTCTTCAG TACCAATGAA CTGCACTTTG AACCAGAGTT TTTAGGGCGA
GTGCGTTTAG TTACCAGTCT GGCATCTTTG ATTGGCGTTT GGATTTTTCA ACGTTTCTTA
AAAAGTGTCT CCTTCCGGCT AATTTTTGGT TGGAGTACGG TCATTTCCGC AGTTTTGGGC
ATGACTATGC TCTTGCTGGT GACCCACACA AATCGGGCTT TGGGTATAGA TGACCGTTGG
TTTAGTTTGG GTGATAGCCT CATTCTCACA GTGATGGGAC AAATTGCCTA TATGCCAGTT
TTGGTACTTT CTGCCAGACT TTGCCCTCCT GGTGTAGAAG CCACATTATT TGCCTTATTG
ATGTCAGTCT TTAATTTAGC CGGCATGGTT TCTTACGAAG TGGGAGCCAT CATCATGCAC
TGGCTAGGAA TTACTGAAAC TAACTTTGAT TTACTTTGGC TTTTGGTATT AATCACTAAC
TTGAGTACAC TATTGCCATT GCCGTTTCTC AACTGGCTAC CAGCCGATGA TGCAGAAATA
GAAACCCAGG CATTAGCACC AGCTTCAGCT AATAGTCAAG TGTCTAATTT AGTTTCTGAA
TTAAGGTTGC GAGAAGCAGA ACCAAAAATA GTTGAATAA
 
Protein sequence
MLIDSSGLSK VKDSVRKQIF FGNEPSAELI AILSVYFVQG ILGLARLAVS FFLKDELLLS 
PVQVSALMGI VALPWMVKPL FGFVSDGLPI FGYRRRPYLV LSGILGAISW ISLATIVHTS
WAATVAIALG SLSVAVSDVI VDSLVVERAR EESVSHVGSL QALCWGASAF GGLITAYFSG
LLLEHFTTRT VFLITASFPL IVSGVAWLIA ESPVSKDGSD NTNLLSVKQQ LQQLRQAFTQ
KSIWLPTAFV FIWQATPTAD SAFFFFSTNE LHFEPEFLGR VRLVTSLASL IGVWIFQRFL
KSVSFRLIFG WSTVISAVLG MTMLLLVTHT NRALGIDDRW FSLGDSLILT VMGQIAYMPV
LVLSARLCPP GVEATLFALL MSVFNLAGMV SYEVGAIIMH WLGITETNFD LLWLLVLITN
LSTLLPLPFL NWLPADDAEI ETQALAPASA NSQVSNLVSE LRLREAEPKI VE