Gene Ava_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1220 
Symbol 
ID3683260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1504211 
End bp1504585 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content46% 
IMG OID637716558 
Producthypothetical protein 
Protein accessionYP_321739 
Protein GI75907443 
COG category[S] Function unknown 
COG ID[COG3651] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGG CGGAAAACGT AATTGGCACA GAATTAGAAC TTTGTTGTTC TTCTCCCGTA 
ACTGGGTTTT ATCGTGATGG ATTTTGCCAA ACGGGAGCTT ACGATACTGG TATGCACGTT
GTCTGCGCTC AAGTGACAGC AGAATTTTTG GAGTTTACAA AATCTCGTGG TAATGACCTG
AGTACACCCT ATCCTGAGTA TAATTTTCCT GGTTTGCAGC CAGGCGATCG CTGGTGTTTA
TGTGCAGCTC GTTGGCAAGA AGCACTGGAA GCCGGAGTTG CACCACCTGT AATTCTTACA
GCCACCCATG CCAGAGCATT AGAAGTCTGT TCTCTAGATG ATTTGCAAAA ACACGCTCTG
ATAAATGGGG ATTAG
 
Protein sequence
MAQAENVIGT ELELCCSSPV TGFYRDGFCQ TGAYDTGMHV VCAQVTAEFL EFTKSRGNDL 
STPYPEYNFP GLQPGDRWCL CAARWQEALE AGVAPPVILT ATHARALEVC SLDDLQKHAL
INGD