| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1122 |
|---|
| Symbol | |
|---|
| ID | 3683513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 1370196 |
|---|
| End bp | 1371341 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637716458 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_321641 |
|---|
| Protein GI | 75907345 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0425173 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGATTAA GTATCGTTAC ACATAATGTA ATTAAAGGTG ATGGTCAAGG ACGGGTTAAT
TATGAAATTG CCCAAGAAGC AATTCGCCGT GGTCATCATG TCATTTTGTT AGCTAGTCAA
GTAGCTCCAG AATTACAACA GAATGAGCAA GTTAATTGGG TTGCTATTTC TGTTAAGCAA
TGGCCTACGG AATTACTCCG TAACTTGATT TTCGCTTTCA TCAGTGCCAA TTGGTTGCAT
AAACACCGTT CTCAAGTTGA TTTGATCAAA ATTAATGGGG CAATTACCCA TGCCTCTGGT
GATGTGAATG CGGTGCATTT TGTCCATAGT TCTTGGTTGA ATTTTTCCTC TAGTAAGGCT
CAGTCAAATT CAGCTAAAAC TAGACAATCA CGCAGGATTT TTTATAATTT TTACCAGTGG
TTATACACCG TTTTAAATGC GCGTTGGGAA AAAAAGGCTT TTCGCCGGGC GCGGGTGGTG
GTGGCAGTTT CTAGTCGGGT GGCTGAAGAT TTGCAAGCCA TTGGTGTAGC GCCAGAAAAG
ATTCGGGTAA TTGTCAACGG TGTGGATTTG CAGGAATTTT CACCGGGAAA TAATCAGCGT
TCACAATGGG GATTACCGGC AGGAGTCCCT TTAGCTCTAT TTGCTGGTGA TATTAGAATC
TCTCGCAAGA ACTTGGATAC AGTCCTGAAA GCTTTAGTTT ATGTGCCAGA TTTACACCTA
GCAGTTGCGG GAATTACGGA AGGAAGTCCA TATCTTCAGT TAGCACAATC CCTGGGATTG
GATGAACGAG TACATTTTTT AGGACTGCGG CGTGATGTTC CCGAACTGAT GAAAGCCGTA
GATTTTTTCG TGTTCCCTTC ACGTTATGAG CCTTTCGGCT TGGTGGTGAT TGAAGCGATG
GCTTCTGGTT TGCCTGTGAT TACTGCTAGT TCCACAGGTG CAGCAGATTT GTTAACGCCG
GAATCTGGGA TAGTTTTAGC GGATTCAGAC GATGTAGAAG CTTTGGCGCA AGCATTATCT
TTGCTAGCAA GCGATCGCAC TTTAAGACAA CAAATGGGAC AAGTTGCTCG CACCATCGCT
GAGCAACACA GTTGGACAAA TATGGCACAG CGTTATATAG ATTTATTCGA GGAGTTGCAC
CAGTAA
|
|---|
| Protein sequence | MRLSIVTHNV IKGDGQGRVN YEIAQEAIRR GHHVILLASQ VAPELQQNEQ VNWVAISVKQ
WPTELLRNLI FAFISANWLH KHRSQVDLIK INGAITHASG DVNAVHFVHS SWLNFSSSKA
QSNSAKTRQS RRIFYNFYQW LYTVLNARWE KKAFRRARVV VAVSSRVAED LQAIGVAPEK
IRVIVNGVDL QEFSPGNNQR SQWGLPAGVP LALFAGDIRI SRKNLDTVLK ALVYVPDLHL
AVAGITEGSP YLQLAQSLGL DERVHFLGLR RDVPELMKAV DFFVFPSRYE PFGLVVIEAM
ASGLPVITAS STGAADLLTP ESGIVLADSD DVEALAQALS LLASDRTLRQ QMGQVARTIA
EQHSWTNMAQ RYIDLFEELH Q
|
|---|
| |