Gene Ava_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1115 
Symbol 
ID3678530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1359383 
End bp1360471 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content37% 
IMG OID637716451 
Productglycosyl transferase, group 1 
Protein accessionYP_321634 
Protein GI75907338 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.282541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTG CTCTAGTCCA TGATTATTTG ACCCAGCGCG GTGGGGCAGA ACGTGTATTT 
GAATTACTTT GTAAACGCTA TCCTGAAGCC GATATTTTTA CATCATTGTA TGACCCAGAA
AAAACTATTG ATATGGGTGA GCGGATAGTT AACACAACAT TCTTGCAAAA AATTCCTGGT
GCAGCCAAAT ACTTTAGATT AATGGCTCCT TTATATTTTC CTGCCTTTCG GGCATTAGAT
TTACAAGATT ATGACTTAAT TATTAGCAGT AGCACCAGCT TCGCCAAAGC AGTTCGGAAA
AAACCAGGTG CTAAACATAT TTGCTTTTGT CATAATGTCA CCCGTTTTCT ATGGGATACA
GAAACTTATT TAAGAGAGTA TAGCGATTAT AGATATTTGT CAGTTTTAAT CGAAAAAGTA
TTTCAATTAA TGCGAGATGT AGACCTGAAA TATGCTCAGG AACCCGATAT TTATATTGCT
AACTCCAGCA CTGTTGCCCG TCGTATTCAG CAGATTTATG GCAAACAGGC AATAATGATT
AACTATCCAA TTGATACTAG TAACTTTGTT TTCTCTGATA CAAAAGACGA ATATTATTTG
GCATCAGCAC GGATGATTAG TTATAAGCGC CTGGATATTA TAGTCGAAGC TTTTAATTGG
CTTGGATGGC CGTTAATCAT CTCTGGGGAT GGGCCAGAAA GAGAAAGATT ACAAGCCAAA
GCTTTGGATA ATATTAAGTT TTTAGGTCAT GTCAGTGACA ACCAACGTAA GGAATTATTC
TCTAAAGCTA AATCTATTAT CGTAGCTGCT TTAGAAGACT ATGGTTTAGT TCCTGTAGAG
GCTAATGCTA GCGGTACACC AGTGATTGCT TTTGGTGCAG GTGGAGTCTT AGATACTCAA
ATAAACGGTC AGACTGGCGT ATTTTTCAAG CGACAAACAC CAGAATCTTT ACAAAAAGCA
TTATTAGAGT CCGGAGAAAT CACTTGGGAT TATGAAAATA TTCGTAATCA TGCCGTGAAT
AATTTTTCTG AGCCAGTTTT CTTTAGTAAA GTTGAGCGAG TTATTACCCA AACTTGTAGC
CTCAATTAA
 
Protein sequence
MKVALVHDYL TQRGGAERVF ELLCKRYPEA DIFTSLYDPE KTIDMGERIV NTTFLQKIPG 
AAKYFRLMAP LYFPAFRALD LQDYDLIISS STSFAKAVRK KPGAKHICFC HNVTRFLWDT
ETYLREYSDY RYLSVLIEKV FQLMRDVDLK YAQEPDIYIA NSSTVARRIQ QIYGKQAIMI
NYPIDTSNFV FSDTKDEYYL ASARMISYKR LDIIVEAFNW LGWPLIISGD GPERERLQAK
ALDNIKFLGH VSDNQRKELF SKAKSIIVAA LEDYGLVPVE ANASGTPVIA FGAGGVLDTQ
INGQTGVFFK RQTPESLQKA LLESGEITWD YENIRNHAVN NFSEPVFFSK VERVITQTCS
LN