Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1110 |
Symbol | |
ID | 3678525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1354061 |
End bp | 1354903 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637716446 |
Product | hypothetical protein |
Protein accession | YP_321629 |
Protein GI | 75907333 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.665042 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCAACA CAATTAAAAA CAAACTCTCT GCAATACATT CTGATTTTGC CTGCGAAGTA GAACGCTGGC AACATATAAA GAATTTACCA TCTCTAGAAA AACGCGATCG CATCATTCTA GATACACTGA AAAAAGAGGG TGTTTATGTC ACGACACTTG CAGATTTAGG TTTAAGCTCA ACTCAAAATT TGCTCCAGGC TGCTAAACAT CAATTGTCCC AGATGCAAAA TGCTAACAAC GAACATCTAG AACAAAAGTG GCCGCAAATT TATACAGTTA CGGGTTTACC AGAGTTTTAT ACCTGGGGAA CAGAGCAAAG ACTACTAAGC ATAATCGAAA ATTATATTGG TCTTCCTATT AAATTTCACG GTGTACATTT ACGTAAAGAT TTTCCTAGCA ATAATCAATT TGGAACTTTG CTATGGCATA GTGATGCAGA AGATCGTCGT CTGATTAAAG TTTTTGTGTA CTTAAATGAT GTGGAAGAAA AGACAGGACC ATTCCAATAC ATTCCTCGTT CATTAACTCC CACATTTAGT TGGAATTATT TTCAACTTTA CTACAAACTT TGGCAGTCAA GCTATATGGG TATCGACGAT GAACAGGTCA AAGCAGTCAT TCCCAAATCA GCTTGGAAAT CATGTCCTGG TCCAGCAGGT ACGGTCATTT TTGTAGATAC CAAAAATACT TTACATCATG GGACAGTGCG GACGGAAGAT CGCTCAACCC TCTTCTTTTG TTATACGGCC AATCCCCCAG AAAGACCAGA CCTTTGTACA CAATACTGGG ATGATACTTA TATTAGGGCT GACTTACTAG AATTAGAGAA AAATTCTGTC TAG
|
Protein sequence | MLNTIKNKLS AIHSDFACEV ERWQHIKNLP SLEKRDRIIL DTLKKEGVYV TTLADLGLSS TQNLLQAAKH QLSQMQNANN EHLEQKWPQI YTVTGLPEFY TWGTEQRLLS IIENYIGLPI KFHGVHLRKD FPSNNQFGTL LWHSDAEDRR LIKVFVYLND VEEKTGPFQY IPRSLTPTFS WNYFQLYYKL WQSSYMGIDD EQVKAVIPKS AWKSCPGPAG TVIFVDTKNT LHHGTVRTED RSTLFFCYTA NPPERPDLCT QYWDDTYIRA DLLELEKNSV
|
| |