Gene Ava_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1110 
Symbol 
ID3678525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1354061 
End bp1354903 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content38% 
IMG OID637716446 
Producthypothetical protein 
Protein accessionYP_321629 
Protein GI75907333 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.665042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAACA CAATTAAAAA CAAACTCTCT GCAATACATT CTGATTTTGC CTGCGAAGTA 
GAACGCTGGC AACATATAAA GAATTTACCA TCTCTAGAAA AACGCGATCG CATCATTCTA
GATACACTGA AAAAAGAGGG TGTTTATGTC ACGACACTTG CAGATTTAGG TTTAAGCTCA
ACTCAAAATT TGCTCCAGGC TGCTAAACAT CAATTGTCCC AGATGCAAAA TGCTAACAAC
GAACATCTAG AACAAAAGTG GCCGCAAATT TATACAGTTA CGGGTTTACC AGAGTTTTAT
ACCTGGGGAA CAGAGCAAAG ACTACTAAGC ATAATCGAAA ATTATATTGG TCTTCCTATT
AAATTTCACG GTGTACATTT ACGTAAAGAT TTTCCTAGCA ATAATCAATT TGGAACTTTG
CTATGGCATA GTGATGCAGA AGATCGTCGT CTGATTAAAG TTTTTGTGTA CTTAAATGAT
GTGGAAGAAA AGACAGGACC ATTCCAATAC ATTCCTCGTT CATTAACTCC CACATTTAGT
TGGAATTATT TTCAACTTTA CTACAAACTT TGGCAGTCAA GCTATATGGG TATCGACGAT
GAACAGGTCA AAGCAGTCAT TCCCAAATCA GCTTGGAAAT CATGTCCTGG TCCAGCAGGT
ACGGTCATTT TTGTAGATAC CAAAAATACT TTACATCATG GGACAGTGCG GACGGAAGAT
CGCTCAACCC TCTTCTTTTG TTATACGGCC AATCCCCCAG AAAGACCAGA CCTTTGTACA
CAATACTGGG ATGATACTTA TATTAGGGCT GACTTACTAG AATTAGAGAA AAATTCTGTC
TAG
 
Protein sequence
MLNTIKNKLS AIHSDFACEV ERWQHIKNLP SLEKRDRIIL DTLKKEGVYV TTLADLGLSS 
TQNLLQAAKH QLSQMQNANN EHLEQKWPQI YTVTGLPEFY TWGTEQRLLS IIENYIGLPI
KFHGVHLRKD FPSNNQFGTL LWHSDAEDRR LIKVFVYLND VEEKTGPFQY IPRSLTPTFS
WNYFQLYYKL WQSSYMGIDD EQVKAVIPKS AWKSCPGPAG TVIFVDTKNT LHHGTVRTED
RSTLFFCYTA NPPERPDLCT QYWDDTYIRA DLLELEKNSV