Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1103 |
Symbol | |
ID | 3678518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1345216 |
End bp | 1345890 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637716439 |
Product | von Willebrand factor, type A |
Protein accession | YP_321622 |
Protein GI | 75907326 |
COG category | [R] General function prediction only |
COG ID | [COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGATA CTTTGACCCT AGATGAAGTA GTAGAGTTTG CTGAGAACCC AGAACCACGC TGTCCTTGCG TGTTGTTGCT CGATACATCT GGCTCCATGC AAGGTGCTGC TATAGAAGCT CTAAATCAGG GCTTGCTCAG TTTGAAAGAT GAGCTGATGA AAAATTCCAT AGCAGCCAGA CGGGTAGAAA TTGCGATCAT TACTTTTGAT AGTCATATCA ATGTAATACA AGACTTTGTA ACTGCCGATC AATTTAACCC ACCAATTCTG ACAGCGCAAG GATTAACCAG TATGGGGGCT GGTATTCACA AAGCGTTGGA CATGGTACAA GAGCGCAAAT CGTTGTATCG TGCCAATGGT GTTGCTTATT ATCGTCCTTG GGTGTTTATG ATTACTGATG GTGAACCACA AGGTGAACTA GATCATTTAG TAGAACAAGC AGCGTTGCGT TTACAAGGTG ATGAGGTCAA TAAACGTGTG GCATTTTTCA GCGTAGGTGT GGAAAATGCG AACATGACAA GGCTGAACCA AATAGCTGTC AGAACGCCTC TGAAACTCAA AGGACTGAAC TTTATTGAAA TGTTTGTTTG GCTATCGGCT AGTATGTCGG CAGTTTCTCA TTCGCAAATT GATGAGCAGG TAGCGCTACC GCCGATTGGC TGGGGATCTA TCTAA
|
Protein sequence | MNDTLTLDEV VEFAENPEPR CPCVLLLDTS GSMQGAAIEA LNQGLLSLKD ELMKNSIAAR RVEIAIITFD SHINVIQDFV TADQFNPPIL TAQGLTSMGA GIHKALDMVQ ERKSLYRANG VAYYRPWVFM ITDGEPQGEL DHLVEQAALR LQGDEVNKRV AFFSVGVENA NMTRLNQIAV RTPLKLKGLN FIEMFVWLSA SMSAVSHSQI DEQVALPPIG WGSI
|
| |