Gene Ava_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1103 
Symbol 
ID3678518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1345216 
End bp1345890 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content44% 
IMG OID637716439 
Productvon Willebrand factor, type A 
Protein accessionYP_321622 
Protein GI75907326 
COG category[R] General function prediction only 
COG ID[COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATA CTTTGACCCT AGATGAAGTA GTAGAGTTTG CTGAGAACCC AGAACCACGC 
TGTCCTTGCG TGTTGTTGCT CGATACATCT GGCTCCATGC AAGGTGCTGC TATAGAAGCT
CTAAATCAGG GCTTGCTCAG TTTGAAAGAT GAGCTGATGA AAAATTCCAT AGCAGCCAGA
CGGGTAGAAA TTGCGATCAT TACTTTTGAT AGTCATATCA ATGTAATACA AGACTTTGTA
ACTGCCGATC AATTTAACCC ACCAATTCTG ACAGCGCAAG GATTAACCAG TATGGGGGCT
GGTATTCACA AAGCGTTGGA CATGGTACAA GAGCGCAAAT CGTTGTATCG TGCCAATGGT
GTTGCTTATT ATCGTCCTTG GGTGTTTATG ATTACTGATG GTGAACCACA AGGTGAACTA
GATCATTTAG TAGAACAAGC AGCGTTGCGT TTACAAGGTG ATGAGGTCAA TAAACGTGTG
GCATTTTTCA GCGTAGGTGT GGAAAATGCG AACATGACAA GGCTGAACCA AATAGCTGTC
AGAACGCCTC TGAAACTCAA AGGACTGAAC TTTATTGAAA TGTTTGTTTG GCTATCGGCT
AGTATGTCGG CAGTTTCTCA TTCGCAAATT GATGAGCAGG TAGCGCTACC GCCGATTGGC
TGGGGATCTA TCTAA
 
Protein sequence
MNDTLTLDEV VEFAENPEPR CPCVLLLDTS GSMQGAAIEA LNQGLLSLKD ELMKNSIAAR 
RVEIAIITFD SHINVIQDFV TADQFNPPIL TAQGLTSMGA GIHKALDMVQ ERKSLYRANG
VAYYRPWVFM ITDGEPQGEL DHLVEQAALR LQGDEVNKRV AFFSVGVENA NMTRLNQIAV
RTPLKLKGLN FIEMFVWLSA SMSAVSHSQI DEQVALPPIG WGSI