| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1027 |
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| Symbol | |
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| ID | 3678695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1243574 |
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| End bp | 1244950 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637716363 |
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| Product | bicarbonate transport system substrate-binding protein |
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| Protein accession | YP_321546 |
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| Protein GI | 75907250 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.181538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGT TTTTTAATCA ATTTTCTCGC CGCAAGTTTA TAGTTACAGC AGGAGCTTCG
GCAGGTGCAG TGTTCCTCAA AGGTTGCTTG GGAAATCCGC CTGAGACTAC CGGAGGAACA
CAATCTGCAC CAACTGCTCA ACCTGCTGCT AATGTTAGCG CAGAGCAAGC ACCAGAAGTC
ACTACTGTGA AGTTGGGATA TATTCCCATT GTGGAATCGG CTCCTTTAAT TATTGCCAAA
GAAAAAGGTT TCTTTGCTAA ATATGGATTA ACTAATGTAG AACTTTCTAA ACAAGCTTCT
TGGGGTTCTG CTAGAGATAA CGTAGAAATT GGTTCGGCTG GTGGTGGTAT TGATGGCGGT
CAATGGCAAA TGCCTATGCC ACACTTGATT ACCGAAGGTT TAATTACTAA GGGTAATCAA
AAGATACCCA TGTATGTGTT ATGTCAATTA ATTACACATG GGAATGGAAT TGCGATCGCT
AACAAGCACC AAGGTAAAGG TATCAGTTTA AAATTAGAAG GCGCTAAGTC TTTATTTAGC
CAACTCAAGT CTTCTACACC CTTCACTGCC GCTTTCACTT TCCCCCACGT CAACCAAGAC
TTATGGATTC GCTACTGGTT AGCCGCAGGC GGTATTGACC CAGATGCAGA TGTCAAACTG
CTGACAGTCC CGGCGGCGCA AACTGTAGCT AACATGAAAA CCGGCACAAT GGACGCTTTC
AGCACAGGTG ACCCCTGGCC ATTCCGCTTG GTCAACGACA AAATTGGCTA CATGGCCGCC
TTAACCGCAG AGATTTGGAA AAATCACCCA GAAGAATACT TGGCAATGAG AGCTGATTGG
GTGGATAAAT ACCCCAAAGC AACCAAAGCG TTACTCAAAG GCATTATGGA GGCGCAACAG
TGGTTAGATA ATTTTGACAA CCGCAAAGAA GCAGCTCAAA TTCTGGCTGG AAGAAATTAT
TTCAACCTCA ATAATCCAGA AATTCTGGCA GACCCATACG TCGGCAAATA TGATATGGGT
GATGGTCGCA AAATTGATGA TAAATCAATG GCGGCTTACT ACTGGAAAGA TGAAAAAGGT
AGTGTTTCTT ATCCCTACAA GAGTCATGAT TTGTGGTTCA TCACAGAAAA TGTACGTTGG
GGATTCTTAC CCAAAGATTA CCTAGCTAAT GGTGCAGCTA AAGCCAAAGA ATTAATCGAT
AAAGTCAACC GCGAAGATAT TTGGAAAGAA GCGGCTAAAG AGGCGGGAAT TGCTGCGGCT
GATATTCCCA CAAGTACATC TCGCGGTGTT GAAGAATTCT TTGATGGCAC AAAATTTGAC
CCCGAAAAGC CAGACGAATA TCTCAAGAGC CTGAAAATCA AGAAAGTTAG TGTTTAG
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| Protein sequence | MTEFFNQFSR RKFIVTAGAS AGAVFLKGCL GNPPETTGGT QSAPTAQPAA NVSAEQAPEV
TTVKLGYIPI VESAPLIIAK EKGFFAKYGL TNVELSKQAS WGSARDNVEI GSAGGGIDGG
QWQMPMPHLI TEGLITKGNQ KIPMYVLCQL ITHGNGIAIA NKHQGKGISL KLEGAKSLFS
QLKSSTPFTA AFTFPHVNQD LWIRYWLAAG GIDPDADVKL LTVPAAQTVA NMKTGTMDAF
STGDPWPFRL VNDKIGYMAA LTAEIWKNHP EEYLAMRADW VDKYPKATKA LLKGIMEAQQ
WLDNFDNRKE AAQILAGRNY FNLNNPEILA DPYVGKYDMG DGRKIDDKSM AAYYWKDEKG
SVSYPYKSHD LWFITENVRW GFLPKDYLAN GAAKAKELID KVNREDIWKE AAKEAGIAAA
DIPTSTSRGV EEFFDGTKFD PEKPDEYLKS LKIKKVSV
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