Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0892 |
Symbol | |
ID | 3681578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1085775 |
End bp | 1087064 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637716226 |
Product | hypothetical protein |
Protein accession | YP_321411 |
Protein GI | 75907115 |
COG category | [S] Function unknown |
COG ID | [COG1808] Predicted membrane protein |
TIGRFAM ID | [TIGR00271] uncharacterized hydrophobic domain [TIGR00341] conserved hypothetical protein TIGR00341 |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000427125 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTCAAC TTATGATCCA AGTCCCAAGA GGCAACGGAA AAGCAGCGAT TGACATTGCC AAATCCCATA ACGGCTCAAA TTTGGCACGA TTTGAAGGGA ATGCAGACGA ACCGATCGAT ATAGTGATGG TTCACGTTTC TAATCGAGAA GTAGGGAAAG TTATAGAGGA ATTGCAAAAC TTACCCAAAG TATATATCAC ACTCATCCCA ACTGGTGTGA TGGCTCTGCA ACCGCCAGCA TCAGAAGCAC CACAGCAAGT TGTAGATGTT GAAGAACGTA GCCCGATTGA GATATTGCTT TCCGGTTTGC AGAGTGTTGG TTCTTGGCAA GGCTTTCTGA GTTACGCCTC AGTTGCAGGT TTTGTAGTTT GGATTGGCTT GTACACGAAT ACAACTTACT TGCTCGTAGC GGCGATGCTA ATTGCACCGT TTGCAGGCCC AGCAATGAAT ACAGCGATCG CTACTGCTTG GGGCGATCGC TCACTCCTGG GTCGGAGTAT TTTACGATAT TTTGCAGCTT TATTGGTGAC AATTTTTACT ACTTGGTTAC TGAGTCTGAT ACTCAGGCAA GAAATTCCTA CAAGTTTAAT GTTGGACAAT AGCCAAGTTT CAGCAGTGGC AGTAATTTTA CCACTTGCAG CTGGAGCAGC AGGCGCACTC AACTTGGTAC AGTCAGAGCG CAGTAGTTTA GTATCTGGTG CAGCCACAGG AATGTTAGTT GCGGCTTCCT TAGCCCCACC TGCGGGAATT ATCGGTATGT CCAGTGCAAT TGGCAGATGG GACATGGTAA TTTCTGGCGT ATTTTTGCTG TTGTTGCAAC TATGCGGCAT TAATTTATCA GCAACCCTCT TGTTCCGAAT TTTTGGGCTG TCTGCTCAAG GGACTCGTTA TCAGCGTGGT AAAAAACAAG TATTCTTTCT TGCTTTGGTC GTCACGGCCA TCGCCTTGAC TGGTTTACTC ACTTGGCAGT TTATTAATTC TCCCAATCTC CAACGTTCTA GCCTAGCCCA ACGTGCTAAC GCTCAGGTGC AAAAAACCGT CGAGCAAGTG GGTTTAGCAA AATTAGTTGA GGCGAATGTG CGCTTTACAC GCGCCAATAT TGCAGGTCAA GATACCTTAC TATCTGTGGT TTATGTGCAG CGTCAACCGC AAGCTACAGC ATCTAGTGAA GAAATTCGCG ATCGCCTTAC CCAAGCAATT CAAACTCAAT TATTGCAGCA AGATTTTAAT GTCACACCTT TAGTTGATGT CAGGGTGCTA GAAACTCCTC CACTAAATAC GGGGGTGTAG
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Protein sequence | MRQLMIQVPR GNGKAAIDIA KSHNGSNLAR FEGNADEPID IVMVHVSNRE VGKVIEELQN LPKVYITLIP TGVMALQPPA SEAPQQVVDV EERSPIEILL SGLQSVGSWQ GFLSYASVAG FVVWIGLYTN TTYLLVAAML IAPFAGPAMN TAIATAWGDR SLLGRSILRY FAALLVTIFT TWLLSLILRQ EIPTSLMLDN SQVSAVAVIL PLAAGAAGAL NLVQSERSSL VSGAATGMLV AASLAPPAGI IGMSSAIGRW DMVISGVFLL LLQLCGINLS ATLLFRIFGL SAQGTRYQRG KKQVFFLALV VTAIALTGLL TWQFINSPNL QRSSLAQRAN AQVQKTVEQV GLAKLVEANV RFTRANIAGQ DTLLSVVYVQ RQPQATASSE EIRDRLTQAI QTQLLQQDFN VTPLVDVRVL ETPPLNTGV
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