Gene Ava_0864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0864 
Symbol 
ID3681765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1056025 
End bp1056678 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content45% 
IMG OID637716198 
Productheat shock protein DnaJ-like 
Protein accessionYP_321383 
Protein GI75907087 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0957797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC TGGAGCGGTA TTATAGGGTA TTGGAATTGG AAGTAGGGGC TACCCTTGAG 
GAAGTTAACC AAGCTTATAA AGATTTGGTG TTTGTGTGGC ATCCCGATCG CCTACCCAAA
GATAATGTCC GCCTACAACA AAAAGCACAA GATAAACTCA AAGCCATTAA CGAGGCTCGT
GAAAAATTAC GCTCGTTAAA TGGCAATGGT AAGGCTCATC ATGTTTATCA CCATCGCCCA
CCGGAACCCC CAAAATCCTA TCAAGAAACC CATCAGCCAC AAAAACAAAA CTCAGACTTG
AGTGGCAAAG ATTTTAGTCG AGCAAATTTG AGTAACAAAG ATTTATCTGG CAGAAACCTC
AGCTATGCGA ACCTGAGTGG TGCTAATCTC AGTGACACTT TTATGCACAA AGTGATTCTC
AGAGGCGCGG ATTTGTCAGA GGCCAACTTG TTTAGAGCTA ATTTACTCTT AGCTGACTTA
AGAGAAGCGA ATTTGCGCTC TGCGAACTTA ATTGGTGCTG ATCTGAGTGG CGCTGACTTG
CGGGGTGCAG ACCTCACAGG CGCGCGGATT CGTTCAGGCG ATCGCTTGCT GGTAAAGTTG
ATAGGCGCAA ACTTAAGTGG TGCGATTATG CCTGATGGAC TTATTCATCG TTAA
 
Protein sequence
MSELERYYRV LELEVGATLE EVNQAYKDLV FVWHPDRLPK DNVRLQQKAQ DKLKAINEAR 
EKLRSLNGNG KAHHVYHHRP PEPPKSYQET HQPQKQNSDL SGKDFSRANL SNKDLSGRNL
SYANLSGANL SDTFMHKVIL RGADLSEANL FRANLLLADL REANLRSANL IGADLSGADL
RGADLTGARI RSGDRLLVKL IGANLSGAIM PDGLIHR