Gene Ava_0837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0837 
SymbollpxD 
ID3681855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand- 
Start bp1021638 
End bp1022687 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content45% 
IMG OID637716171 
ProductUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
Protein accessionYP_321356 
Protein GI75907060 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0756142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.0499853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA GCGACATCAT ATCAAAGCTA GAGGTGACAA ACTATAGCCT CACGCAAAAT 
CCAAACAATG ACCCTGAAAT TACAGGGATG GCAGCTATTG ATGAAGCCAC AAGTGGTACT 
CTCAGCTATA TAGAAGGTGC AAAGTTTGCA TCTTTTATCG CTAAGACAAA TGCTAGTGCT 
TTGATTTTGC CACAAAATGA AGCGATGCAG GCTCAAGCCC AAGAGCGGGG TATTGTTTGG 
ATGGCGACAC CAGAACCGCG ATTGTTGTTT GCTAAAGCGA TCGCTCTATT CTACCAACCA 
TACACCCCAA CCCCAGAAAT TCATCCCACA GCCGTCATTC ACCCCACAGC CAAAATTGGC 
AATGATGTTT ACATCGGCCC CCATGTCGTG ATTCAACCAG GGGTAGAAAT TGGTAACGGT 
GTAATTATTC ACCCCAACGT AGTTATTTAC CCAGGTGTAA AAATAGGCGA TCGCACCATC 
TTACACGCTA ACTGCACTAT TGAAGAACGC AGCCAAATTG GTGCAGATTG CGTTATTCAC 
AGTGGTGCTG TCATCGGTGG GGAAGGCTTT GGCTTTGTTC CTACCCGCAC TGGTTGGTAC 
AAAATGGAAC AATCAGGCTA TGTAGTTTTA GAAGATCGCG TAGATATAGG TTGTAACACT 
ACCATTGATC GCCCTTCAGT GGGAGAAACC AGAGTGGGAT ACGATACCAA AATTGATAAC 
TTAGTCCAGA TTGCTCATGG TTGCCAAATT GGTGCAGGCT GTGCGATCGC CGCCCAAACT 
GGTATGGCTG GAGGTGTAAA ATTAGGCAAC CGCGTGATTT TGGCAGGACA AGTGGGAATT 
GCTAATCAAG CAAAAATGGG TGACGGCTCG ACTGCTTCTG CTCAAACAGG TATTCTCCAC 
GATGTTAAGC CAGGAGAAGT TGTTTCTGGT ACTCCGGCTA TTCCTCACAA AATGTATCTC 
AAAATCGCTG CACTCTATAG CCGCTTACCA GATATGTACC AAGCTTTTAG ACAATCACAA 
CGTCAATTAG AGGAGGAAGG TAAAAGGTAA
 
Protein sequence
MKFSDIISKL EVTNYSLTQN PNNDPEITGM AAIDEATSGT LSYIEGAKFA SFIAKTNASA 
LILPQNEAMQ AQAQERGIVW MATPEPRLLF AKAIALFYQP YTPTPEIHPT AVIHPTAKIG 
NDVYIGPHVV IQPGVEIGNG VIIHPNVVIY PGVKIGDRTI LHANCTIEER SQIGADCVIH 
SGAVIGGEGF GFVPTRTGWY KMEQSGYVVL EDRVDIGCNT TIDRPSVGET RVGYDTKIDN 
LVQIAHGCQI GAGCAIAAQT GMAGGVKLGN RVILAGQVGI ANQAKMGDGS TASAQTGILH 
DVKPGEVVSG TPAIPHKMYL KIAALYSRLP DMYQAFRQSQ RQLEEEGKR