Gene Ava_0776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0776 
Symbol 
ID3680501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp949242 
End bp950828 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content34% 
IMG OID637716105 
Producthypothetical protein 
Protein accessionYP_321295 
Protein GI75906999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0569567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00186143 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATTAC CAAAAATTAA TCTACCTTTA CTGATAATTT CATTGGGTAT AATTTTTTCA 
TTATACTTAC TATCACGAGT GCCTGAGGAT ATTTATTTTA GCGGCGACGC TGGATTAAAA
GCCCTACTAG CAAAGCAGTT TAGTTCTGGG AAGTTAAACT TTGATCTAGA TTTATCAGTA
CCCTCATGGG TACGTAATCT CTGGGATAAT GGGCTTTATC CTTTTGAACC ACCCTTTAGT
TATAAAATAT CTAATCGTTA CTACATTACT TTCCCCTTTA CTTTTCCCTT AATCACAGCG
CCTTTCCATG CCCTATTCGG TTATAGAGGT TTTTATATAG TACCCCTATT ATCTACATGG
ATAATCTGGT TTAATTTTTA TCGCATTTGC CAATTTTTCA AAATTAGTGT ACTCACAACT
TCTATAGGTA TTACCACACT AATATTTGCT TCTCCACTCA CCATGTATAG TGCTATGTAT
TGGGAACATA CACTTGCAGT GAGTTTAGCT TTTGCTGGAC TAGTAATTAT TTTAAGTAAG
GGTGAAGAAG GGTTTACTCA AAAAGATGCC CTAGTTAGTG GAATATTGAT TGGTTTATCA
GTCTGGTTTA GACCGGAGTT TCTTGCCCTA GTGGCAATTT TAATTCCCTT AGCTCTTTCT
TCCTATAAAA TTAAGCTAGG AAAAATCAGT ATTATCAATC AGCATAAAAT CTTATTTATT
ATTAGCTTGT TAGCAACGGT TTCCTGCTTT TTTATTATTA ATAAATTAAT TTATAATCAC
CCCTTAGGCG CTCATGCACT CCAAGTCGTA GAAGAATTTT CTCTTCAAGA ACGGTTATCA
AAAGCTCATA GGATTTTCGG TCGTCTGTGG AAAAATTTCC GAGAATACTT TCCTATTGTA
TATTTCACAA TTATTTTTAC TGGGTTGTCA GTGTTCTATA AATCTATAAA ACTGACAGCC
GCAATGAAAA AAATTGTTTT GATATCCATC CCCTTCATTT TTTTAGTACC TATACTTCTA
CCTAGTGATG GTGGTAAACA ATGGGGACCT AGATTTTTGT TGATTCTGAT TCCGCTACTG
AGTCTACTAG CAGCATTTCT TTTAGAATCT ACTTTATCAA TTAGACAGTT TGGTATCAAA
TATATTAGTA CTGGCATCTT CACAGCACTA TTTATGATTG GTGTTTACGC AAATACATTT
ATGGGGATAA ATTACAGCTA TTTTACTGGA AACACAGAAG CTATAGATAT CCGCAATTTT
TTGCGCCAGG ATGATCACAA AATTGTAGCC GTTGCTCATC AATATATTAG CCAAAGTTTT
GAAGCTGCTT TTAAAAATAA ACTATTTTTT CTTACAAAGA ATTTAGACGA CACCAGTAAG
CTAGGTTTAG CTTTAAACGA ACAAGGATAT GATAATTTTG TTTACGTATG TGCTTCTTAT
GATCCATGTT TCTCTTCACC GACTATACCT AGTCAAATAA ATATTTCTGC GACAGACAAA
CTTTTACGCG TTCAACTGAA AGAAGTGAAA AAGAACAAAA AGTATATCAT CCAAGAAGCT
GAGATTGTTC AGGTAAAAGA TAATTGA
 
Protein sequence
MKLPKINLPL LIISLGIIFS LYLLSRVPED IYFSGDAGLK ALLAKQFSSG KLNFDLDLSV 
PSWVRNLWDN GLYPFEPPFS YKISNRYYIT FPFTFPLITA PFHALFGYRG FYIVPLLSTW
IIWFNFYRIC QFFKISVLTT SIGITTLIFA SPLTMYSAMY WEHTLAVSLA FAGLVIILSK
GEEGFTQKDA LVSGILIGLS VWFRPEFLAL VAILIPLALS SYKIKLGKIS IINQHKILFI
ISLLATVSCF FIINKLIYNH PLGAHALQVV EEFSLQERLS KAHRIFGRLW KNFREYFPIV
YFTIIFTGLS VFYKSIKLTA AMKKIVLISI PFIFLVPILL PSDGGKQWGP RFLLILIPLL
SLLAAFLLES TLSIRQFGIK YISTGIFTAL FMIGVYANTF MGINYSYFTG NTEAIDIRNF
LRQDDHKIVA VAHQYISQSF EAAFKNKLFF LTKNLDDTSK LGLALNEQGY DNFVYVCASY
DPCFSSPTIP SQINISATDK LLRVQLKEVK KNKKYIIQEA EIVQVKDN