| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0728 |
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| Symbol | |
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| ID | 3679383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 899633 |
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| End bp | 901264 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637716056 |
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| Product | major facilitator transporter |
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| Protein accession | YP_321247 |
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| Protein GI | 75906951 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.165324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.170195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCGT CTGATTTGGA TAGAAAAATT CTGCCATTGT CGCCAAGCCA CGCCAAAAGA
CAGAATAGGG CATCAGATCC TACAGCACCG GCTCATTTAA GTGCTGTTCC CTATCCTGTA
CCCAATCACA AAGATAGCCA GGAATCATCT CCCCAAGATG TTCCTACCAA TGAGAAAAAT
GGTATTTCGC AAAATCCCCA AACCGATTTA CCCAATGAAC TAGAAAAACC ATCCTCAGAG
CCGTTAAAGA TATTAGAGTT TAATGGTCAT GGGCAGAGTG TACCAGTAGT TACTACTCCA
GAAGCAACAA CAGATGACTC TGGTTCTGGT GGGGAAGCCA ACTCTGGAGA TATTGAACAT
CAAGGGTTTT TAGCTGTATT CAAAAACCCC AATTTCTTAG CGCTGTGGGG TGGACAAGTC
TTTTGTCAAC TGGCAGATAA GGTGTATTTG GTATTAATGA TCGCCTTGAT TAATACTCAG
TTCCAGGCAA GTAATCAAAG TATTAGCGGT TGGGTGTCAG CATTGATGAT GGCTTTTACC
ATACCAGCAG TGTTGTTCGG TTCTGTGGCT GGCGTATTTG TGGATAGGTG GTCAAAAAAA
GCTGTATTAG TAGCGACAAA TGCCTGGCGT GGTATTTTGG TTTTAGCTAT TCCTTTGTTG
CTGTGGCTAA CTCATGATTG GCAACCCATA GGAGTTTTAC CAGTAGGTTT TCTCATCATT
TTGGGTGTGA CATTTTTGGT GTCCACACTA ACACAGTTTT TTGCCCCAGC AGAACAAGCC
GCAATTCCCC TGGTGGTGAA AGAACAGGAT TTACTTTCGG CTAATTCACT ATACACAACC
ACAATGATGG CTTCGGTGAT AGTGGGTTTT GCTGTGGGAG AACCACTACT GGCAGTTGCC
GATGGTATTT GGTCGCAACT AGGGGGTAAT AATGGCTTTG GCAAAGAACT TTTGGTTGGT
GGTAGTTATG CGATCGCCAG TATAATTTTG CTGTTGTTGG TAACTCACGA AAAAACCCAC
GCACCAGAAA CAGAATTTCC CCACGTATTT TCAGACTTAC GCGATGGTTT ACGTTACCTC
AAAGAAAACT ACCGCGTCCG TAATGCTCTA TTACAATTAA TGATTTTATT TTCTGTCTTT
GCCGCCTTAA CTGTTTTAGC AGTACGCATG GCAGAAATTA TTCCTAATAT CAAAGCTTCC
CAATTCGGTT TTTTACTGGC GGCTGGTGGC GTTGGTATTG CAGCTGGCGC GACAATTTTG
GGTCAGTTTG GTCAACGCTT CTCCTATACT CAACTGAGCC TGTGTGGTTG TTTAGGTATG
GCAGCATCCT TAGTTGGTCT TTCTATCTTC ACGACACAAC TAGGATTGGT GTTACTTTTA
GTAACATCCT TGGGTATTTT TGGCTCTTTA ATCGGTATAC CCATGCAGAC AGCCATCCAA
ACAGAAACCT TGCCCGAAAT GCGTGGTAAA GTATTCGGTC TGCAAAATAA TGTGATTAAT
ATTGCTCTGT CCCTACCTTT GGCGTTAGCA GGTGTGGCAG AAACCTTTGT AGGATTACAA
GCTGTCTTTT TGGGATTAGC GGCGATCGTA TTTTCCGGAG GTATCTTAAC TTGGTATAAC
TCTCGTGATT AA
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| Protein sequence | MQPSDLDRKI LPLSPSHAKR QNRASDPTAP AHLSAVPYPV PNHKDSQESS PQDVPTNEKN
GISQNPQTDL PNELEKPSSE PLKILEFNGH GQSVPVVTTP EATTDDSGSG GEANSGDIEH
QGFLAVFKNP NFLALWGGQV FCQLADKVYL VLMIALINTQ FQASNQSISG WVSALMMAFT
IPAVLFGSVA GVFVDRWSKK AVLVATNAWR GILVLAIPLL LWLTHDWQPI GVLPVGFLII
LGVTFLVSTL TQFFAPAEQA AIPLVVKEQD LLSANSLYTT TMMASVIVGF AVGEPLLAVA
DGIWSQLGGN NGFGKELLVG GSYAIASIIL LLLVTHEKTH APETEFPHVF SDLRDGLRYL
KENYRVRNAL LQLMILFSVF AALTVLAVRM AEIIPNIKAS QFGFLLAAGG VGIAAGATIL
GQFGQRFSYT QLSLCGCLGM AASLVGLSIF TTQLGLVLLL VTSLGIFGSL IGIPMQTAIQ
TETLPEMRGK VFGLQNNVIN IALSLPLALA GVAETFVGLQ AVFLGLAAIV FSGGILTWYN
SRD
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