Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0725 |
Symbol | |
ID | 3679380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 896592 |
End bp | 897356 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637716053 |
Product | peptidase, metallopeptidase |
Protein accession | YP_321244 |
Protein GI | 75906948 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5549] Predicted Zn-dependent protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.364392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.750618 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGAATA AAATTCAACA CCCAAAACCT AACACCCTCA AGAATTTTCG ATCAAAGCAC TTACTAGCAG CTCTGGCATT ATTTATAGGT ACAGGGCTGC TCATTATTTT AACTAGCCTC CAACTTAGTA ACGCCAACCC TTCATCCCCA TCACCTCTCA AACCCCATCC TCTACCGTCT ACCCTCGCAC AATGGCAAGA CAGCACCAAT AGCGGTGATT ACTTTTCTCA AGTTACAACT ACTGATGTCG GTTATTTAGT GTGGTCACAA TTTCCCGTGC GAGTTCATAT CAAAAGACCA CAACTAATGA ACGCACAACA GGCACAAACA TGGGTTGATA ATGTTTTCAC AACTGTGCAG GAATGGGCTA ATTATTTGCC TTTGGTAATT GTAGAACAGA CTGAAGTTGC CGATATTACC ATTGAGCGCA AAACCCCACC TTTAGAAATA GGTAAAGATA AAATCCCCCG CGCCCGTTCT GCTCTCACCC GCTACGAATT ATATACAAAG AATAATGTCT TATCACACCG CTTTACTATC CTATTGAGTC CTACCCAAAC AGGTAACTAT CTCCTAGCCG CAGCCCGCCA CGAACTCGGT CACGCTTTGG GAATTTGGGG GCATAGTTCC TTACCAACCG ATGCTTTATA TTTTTCCCAA GTCCGCAACC CACAGCCAAT TTCTCCCAGA GATGTCAATA CTTTGAAGCG AGTTTATCAA CAACCAACTA GTTTGGGTTG GGCTTTAGAA ATTGCTCAAA AATAA
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Protein sequence | MGNKIQHPKP NTLKNFRSKH LLAALALFIG TGLLIILTSL QLSNANPSSP SPLKPHPLPS TLAQWQDSTN SGDYFSQVTT TDVGYLVWSQ FPVRVHIKRP QLMNAQQAQT WVDNVFTTVQ EWANYLPLVI VEQTEVADIT IERKTPPLEI GKDKIPRARS ALTRYELYTK NNVLSHRFTI LLSPTQTGNY LLAAARHELG HALGIWGHSS LPTDALYFSQ VRNPQPISPR DVNTLKRVYQ QPTSLGWALE IAQK
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