Gene Ava_0725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0725 
Symbol 
ID3679380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp896592 
End bp897356 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content43% 
IMG OID637716053 
Productpeptidase, metallopeptidase 
Protein accessionYP_321244 
Protein GI75906948 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5549] Predicted Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.364392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.750618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAATA AAATTCAACA CCCAAAACCT AACACCCTCA AGAATTTTCG ATCAAAGCAC 
TTACTAGCAG CTCTGGCATT ATTTATAGGT ACAGGGCTGC TCATTATTTT AACTAGCCTC
CAACTTAGTA ACGCCAACCC TTCATCCCCA TCACCTCTCA AACCCCATCC TCTACCGTCT
ACCCTCGCAC AATGGCAAGA CAGCACCAAT AGCGGTGATT ACTTTTCTCA AGTTACAACT
ACTGATGTCG GTTATTTAGT GTGGTCACAA TTTCCCGTGC GAGTTCATAT CAAAAGACCA
CAACTAATGA ACGCACAACA GGCACAAACA TGGGTTGATA ATGTTTTCAC AACTGTGCAG
GAATGGGCTA ATTATTTGCC TTTGGTAATT GTAGAACAGA CTGAAGTTGC CGATATTACC
ATTGAGCGCA AAACCCCACC TTTAGAAATA GGTAAAGATA AAATCCCCCG CGCCCGTTCT
GCTCTCACCC GCTACGAATT ATATACAAAG AATAATGTCT TATCACACCG CTTTACTATC
CTATTGAGTC CTACCCAAAC AGGTAACTAT CTCCTAGCCG CAGCCCGCCA CGAACTCGGT
CACGCTTTGG GAATTTGGGG GCATAGTTCC TTACCAACCG ATGCTTTATA TTTTTCCCAA
GTCCGCAACC CACAGCCAAT TTCTCCCAGA GATGTCAATA CTTTGAAGCG AGTTTATCAA
CAACCAACTA GTTTGGGTTG GGCTTTAGAA ATTGCTCAAA AATAA
 
Protein sequence
MGNKIQHPKP NTLKNFRSKH LLAALALFIG TGLLIILTSL QLSNANPSSP SPLKPHPLPS 
TLAQWQDSTN SGDYFSQVTT TDVGYLVWSQ FPVRVHIKRP QLMNAQQAQT WVDNVFTTVQ
EWANYLPLVI VEQTEVADIT IERKTPPLEI GKDKIPRARS ALTRYELYTK NNVLSHRFTI
LLSPTQTGNY LLAAARHELG HALGIWGHSS LPTDALYFSQ VRNPQPISPR DVNTLKRVYQ
QPTSLGWALE IAQK