Gene Ava_0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0704 
SymbolrpsH 
ID3678850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp880666 
End bp881067 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content47% 
IMG OID637716032 
Product30S ribosomal protein S8 
Protein accessionYP_321223 
Protein GI75906927 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000118286 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCTA ACGACACAAT TGCAGATATG CTGACGCGCA TCCGCAATGC TAACATGGCA 
AGGCATCAAA CTACACTAGT GCCAGCTACA AAAATGACTC GTAGCATTGC TAAAGTGCTA
CAGGAAGAAG GCTTTATTGC TGAAATTTCC GAAGAAGGAG ACGAAGTAAA ACGTAACCTG
GTGATTGCCC TGAAATACAA GGGGAAAAAT CGTCAACCAC TAATTACCGC CCTTAAGCGT
GTAAGTAAGC CTGGGTTACG TGTTTACTCC AACCGTAAGG AATTACCAAG AGTACTAGGT
GGCATCGGTA TTGCCATTAT TTCCACATCC AGTGGGATCA TGACCGACCG CGAAGCACGG
CGGCAAAACT TGGGTGGTGA AGTACTCTGC TACGTCTGGT AG
 
Protein sequence
MAANDTIADM LTRIRNANMA RHQTTLVPAT KMTRSIAKVL QEEGFIAEIS EEGDEVKRNL 
VIALKYKGKN RQPLITALKR VSKPGLRVYS NRKELPRVLG GIGIAIISTS SGIMTDREAR
RQNLGGEVLC YVW