| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0698 |
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| Symbol | rplP |
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| ID | 3678844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 878316 |
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| End bp | 878744 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637716026 |
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| Product | 50S ribosomal protein L16 |
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| Protein accession | YP_321217 |
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| Protein GI | 75906921 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000251243 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAAGTC CAAGAAGAAC TAAATTCCGC AAACAACAAC GCGGGCGGAT GGGAGGGTTA
GCCCACCGGG GTAGCACCCT CAACTTTGGA GATTTCGCAC TCCAAGCCCA AGAACCAGCT
TGGATCACCT CTCGACAAAT TGAGGCTTCC CGTCGGGCAA TGACTCGTTA TATCCGCCGG
GGTGGCAAAA TCTGGATTCG GATTTTCCCA GACAAGCCAG TAACCATGCG CCCAGCAGAA
ACCCGGATGG GTTCCGGTAA AGGTAATCCA GAGTTTTGGG TAGCTGTAGT TAAACCAGGT
CGGATTTTAT TTGAAATCGC CGGTGTTACA GAAGAAATTG CTCGTGAAGC GATGCGCCTA
GCGGCTTATA AGCTACCAAT TAAAACTAAG TTTATTGTGC GTTCTCAAGT TGTAGAGGAA
CAGGAGTAG
|
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| Protein sequence | MLSPRRTKFR KQQRGRMGGL AHRGSTLNFG DFALQAQEPA WITSRQIEAS RRAMTRYIRR
GGKIWIRIFP DKPVTMRPAE TRMGSGKGNP EFWVAVVKPG RILFEIAGVT EEIAREAMRL
AAYKLPIKTK FIVRSQVVEE QE
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