Gene Ava_0667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0667 
Symbol 
ID3678638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand- 
Start bp848851 
End bp849552 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content44% 
IMG OID637715995 
Producthypothetical protein 
Protein accessionYP_321186 
Protein GI75906890 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.142799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.0573866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCTTG GTGGGGTCTT TTGGCATTCA TCAAGCTTCA CATCGGTAAA CGTTTTTCAG 
GAGCTTGAGA GAGTGTTAAC AGCTTTTACC GCAGGTTTAT TACTAATTAC AGTTTCAGAA 
CTAGGCGATA AAACTTTTTT CATCGCCATG ATCTTGGCAA TGCACCATTC CCGAAGATGG 
GTATTTACAG GAGTAGTGGG CGCTTTAGCC GCAATGACAA TACTCTCGGT GTTATTTGGC 
AAAGCTGCAT CTCTATTGCC ACCAGTGTAT ATTTATTACG CTGAAATAAC CTTATTTATT 
GCCTTTGGTC TGAAACTGTT GTATGACGCT AGTAAGATGT CGGCGGCAGC AGATAAAGCT 
GAAGTGATGG AAGAGATGGA AGAGGCCAAA GCAGCCGTAG AAAAAGCAGA TTTGCAGCTA 
CCAAAACAAA AAACGCCCTT ATCAATTATC TTAGAAGCCT TTGTCTTGAC TTTTATGGCC 
GAGTGGGGCG ATCGCACCCA AATTGCTACC ATAGCCTTAG CCGCAGGTAA TAACATCATT 
GGTGTCACCA TAGGAGCTAT TTTAGGTCAT GCCATTTGTG CAGCGATCGC CGTCATTGGA 
GGCAAAATGA TTGCCGGAAA AATTTCTGAA CGTCAACTCA CCTTTGCCGG CGGATGCCTA 
TTTTTGATTT TTGGTATTGT CGCCGCTATT GAAGGAGTGT AA
 
Protein sequence
MWLGGVFWHS SSFTSVNVFQ ELERVLTAFT AGLLLITVSE LGDKTFFIAM ILAMHHSRRW 
VFTGVVGALA AMTILSVLFG KAASLLPPVY IYYAEITLFI AFGLKLLYDA SKMSAAADKA 
EVMEEMEEAK AAVEKADLQL PKQKTPLSII LEAFVLTFMA EWGDRTQIAT IALAAGNNII 
GVTIGAILGH AICAAIAVIG GKMIAGKISE RQLTFAGGCL FLIFGIVAAI EGV