Gene Ava_0579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0579 
Symbol 
ID3682273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp726435 
End bp727940 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content44% 
IMG OID637715907 
Producthypothetical protein 
Protein accessionYP_321098 
Protein GI75906802 
COG category[S] Function unknown 
COG ID[COG1649] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.521805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.945444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAATA TGTCTAACCG TCCCTTGAAT CATGTAAGAA TAAGATTACT TTACCGACAG 
CTAGTAACAG CAATTTTCAC TAGCAGCCTT TTGCTTCCCT ATTTGGGGAT AGAACCAGTC
CAGGCACAGG TAACAGAATT TTGCCAGATA TCATCAACAG CAGCACAAAC AAAAGAAAAG
CTACGTTTAT CGGCGCTCAA AGGCAATCAA GATGCGCGAA AACGCTATCA AGGACTAATC
AAACAACAGG CTCAGGAATT ACAAAAATGT CGTAGTCGCA CATGGCCGAA CATCCAAGCC
GTATGGTTAC GTTTATATCC TTGCGATATG AAACCAGGGG CTATAGACCA AATTATGGAT
CGGATGGTTA ATCGTGGCTA TAACGAAGTT TATCTAGAGG TATTCTACGA TGGGCGAGTG
TTGTTACCCG CATCTGCTAA CCCGACAGTT TGGCCGTCTG TGATTCGCAC AAAGGGCGCA
GAAAAAGTTG ATTTACTAGC TACAGCAATT CAAAAAGGAC GACAACGGGG CTTAAAAGTC
TACGGTTGGT TGTATACGAA TAATTTTGGT TATAATTATG CACTGCGGCG AGATAGGGAA
GGTGCGATCG CTCGCAATGG TAAAGGTCAA ACTAGTTTAT ACGTTGTCGA TAATGGGTCT
CAAGTCTTCA TTGACCCATA CAACGAACAA GCCAAACGCG ACTACTATCG CATGGTTCAA
GAAATAGTCC GCCGTCGTCC AGATGGTTTG TTGTTTGACT ATGTGCGTTA CCCACGCCAA
GCAGGTAGTA ATTCTATTGC TACTAAAGTT GCAGATTTGT GGTTGTATAC GGAGGCTACC
CAAGCAGCTT TATTTCGTCG CGCCCAGAAT AAGAAGGGGT TGGAGTTAAT TCGTCGCTTT
TTGAGCCAAG GTTATGTCAC CCCAGCAGAT ATCAACGATG TTGATCAACT TTATCCTCAA
GAGGGTGAAC CTATGTGGCA AGGTCGCATT GTACCACCAC AGCAGAAGTC ATTAATGACA
CCCACAGCTA GACAACCAAT TTTACAAATG GATTTGTGGC TATTGGCGAT CGCTCATTCT
ATGCAGGGTA TTATAGATTT TGTCTCTTTA GCTACCCACC CAGCCAAACA AATCAATATT
CCTACTGGTG TTGTCTTTTT CCCTGATGGC AATCAAACAG TAGGACAAGG TTATGATTCT
CGCTTGCAAC CTTGGGATAA ATTCCCTAAT TCCTTACAAT GGCATCCCAT GTCTTATGCT
ACCTGCGGCA ATGTCAATTG TATTGTGGAG CAAGTACAGC GAGTCTTAAG CATGGCTCAA
CCAGGGACAA AGATTATTCC GGCGTTAGCG GGGAACTGGG GAGAATCAGT CAGTAATCGT
CCTCCCCTAG AAGTACAAAT GCAGGCGCTA CGACCATTTG CATCTAAACT CAAGGGTGTA
AGCCATTTTG CTTATTCTTG GCAGTATCCA GAACATGATA GCGATCGCAA ATCTTGCCGT
AATTAA
 
Protein sequence
MSNMSNRPLN HVRIRLLYRQ LVTAIFTSSL LLPYLGIEPV QAQVTEFCQI SSTAAQTKEK 
LRLSALKGNQ DARKRYQGLI KQQAQELQKC RSRTWPNIQA VWLRLYPCDM KPGAIDQIMD
RMVNRGYNEV YLEVFYDGRV LLPASANPTV WPSVIRTKGA EKVDLLATAI QKGRQRGLKV
YGWLYTNNFG YNYALRRDRE GAIARNGKGQ TSLYVVDNGS QVFIDPYNEQ AKRDYYRMVQ
EIVRRRPDGL LFDYVRYPRQ AGSNSIATKV ADLWLYTEAT QAALFRRAQN KKGLELIRRF
LSQGYVTPAD INDVDQLYPQ EGEPMWQGRI VPPQQKSLMT PTARQPILQM DLWLLAIAHS
MQGIIDFVSL ATHPAKQINI PTGVVFFPDG NQTVGQGYDS RLQPWDKFPN SLQWHPMSYA
TCGNVNCIVE QVQRVLSMAQ PGTKIIPALA GNWGESVSNR PPLEVQMQAL RPFASKLKGV
SHFAYSWQYP EHDSDRKSCR N