Gene Ava_0536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0536 
Symbol 
ID3682366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp674697 
End bp675146 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content42% 
IMG OID637715864 
Productferric uptake regulator family protein 
Protein accessionYP_321055 
Protein GI75906759 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAC AGGCAATATC GACAAAACCA ATTCGTTCTC TAGAAGATGC TCTTGAGCGT 
TGTCAGCTGT TGGGTATGCG CGTCAGTCGT CAGCGCCGTT TTATTCTGGA ACTGCTGTGG
CAAGCAAATG AGCATCTTTC TGCTAGAGAA ATTTATGATC GCCTCAACCA ACAAGGCAAA
GACATTGGCC ATACATCTGT ATATCAAAAC CTAGAAGCAT TATCAACTCA AGGCATTATT
GAGAGTATCG AACGTTGTGA CGGGCGCTTA TACGGTAATA TTAGTGACTC TCACAGTCAT
GTTAATTGCC TAGATACTAA CCAAATTTTG GATGTGCATA TTCAACTTCC AGAGGCATTT
ATCCAAGAAG TTGAACAAAG AACGGGAGTG AAGATTACAG ATTATAGTAT CAACTTCTAT
GGATATCGGC ATCCTCAAGA GGAAGAGTAG
 
Protein sequence
MQQQAISTKP IRSLEDALER CQLLGMRVSR QRRFILELLW QANEHLSARE IYDRLNQQGK 
DIGHTSVYQN LEALSTQGII ESIERCDGRL YGNISDSHSH VNCLDTNQIL DVHIQLPEAF
IQEVEQRTGV KITDYSINFY GYRHPQEEE