| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0507 |
|---|
| Symbol | |
|---|
| ID | 3682375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 639277 |
|---|
| End bp | 639807 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637715834 |
|---|
| Product | CheW protein |
|---|
| Protein accession | YP_321026 |
|---|
| Protein GI | 75906730 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.325512 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAGCA AACCGGACTT TTTAAACGGC GGTGGTCAAG ACCATTTCCG CCCAGAATTA
CAAGTAGAAA GTCCTGAAGG TGAGTTACAT CTACGGTTTT ATATTCCCTC GCATCAGGAG
TTTGCACTAC CCGCAACTGG TATTAGAGAG GTGATGGAAC TAAGTCCCGA TAGAATCACC
CCGATTCCTA ATGCTTCTCC TTTACTTTTG GGTACTCTAA ATTTACGAGG TCGAGTAATT
TGGGTGGCAG ACTTGGGTCA ATTTCTAGGG GAAGCAACTC CCTTAAACAC AGACAGAGCA
GAAATTCCGG TGATTGCAGT TCAGGAGCAA GACACAACTG TGGGTTTAGC TGTGGATGCG
ATCGGCGGTA TGGACTGGCT AGATGTACAA AATCTCATGC CACCTACAAG CATACCGGAT
ACTATGGCTC CATTTTTGCG GGGAGAGTGG TTATTAGAGC CTAAAAACAA CCAATCTCTA
AGACTACTCG ACCAAATGGC AATTTTGCGG AGTGCGAGGT GGGCAGGATG A
|
|---|
| Protein sequence | MVSKPDFLNG GGQDHFRPEL QVESPEGELH LRFYIPSHQE FALPATGIRE VMELSPDRIT
PIPNASPLLL GTLNLRGRVI WVADLGQFLG EATPLNTDRA EIPVIAVQEQ DTTVGLAVDA
IGGMDWLDVQ NLMPPTSIPD TMAPFLRGEW LLEPKNNQSL RLLDQMAILR SARWAG
|
|---|
| |