Gene Ava_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0405 
Symbol 
ID3682624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp521049 
End bp521453 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content44% 
IMG OID637715734 
Productferric uptake regulator family protein 
Protein accessionYP_320926 
Protein GI75906630 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.165057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCCA TACGCACCCG CAGTCAAGAG CGCATTTTAA GCCTGTTGCA AACCATTAAA 
CAAGGTATTT CTGCCCAGGA TATTTATGTA GAACTCCGTA ATCGCAATCA GAGTATGGGC
TTAGCAACAG TTTATCGTTC CTTGGAAGCC TTAAAACTAG AAGGCTTGGT GCAGGTACGG
ACTTTACCCA ATGGCGAAGC TCTCTACAGC CTCGCGCAGC AAGATAAACA CCACCTTACG
TGCCTGCAAT GTGGTGTATC TATTCCTATT CATCAATGCC CTGTCCACAA CTTAGAAGAC
CAGTTAGAAA CTGACCATAA GTTTAAAATT TTCTACCACA CTCTGGAGTT TTTCGGTTTG
TGTGGTAAGT GCCAAATGAA TCACGCGAGT GAAATTAGTC ACTAG
 
Protein sequence
MRAIRTRSQE RILSLLQTIK QGISAQDIYV ELRNRNQSMG LATVYRSLEA LKLEGLVQVR 
TLPNGEALYS LAQQDKHHLT CLQCGVSIPI HQCPVHNLED QLETDHKFKI FYHTLEFFGL
CGKCQMNHAS EISH