Gene Ava_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0397 
Symbol 
ID3682675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp514033 
End bp514479 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content39% 
IMG OID637715726 
Productthioesterase superfamily protein 
Protein accessionYP_320918 
Protein GI75906622 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.995435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.293659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTTA CTTATCATCG GACAATTCAC TTTCAAGATA CGGACGCTGC GGGAGTAGTT 
TATTTTGCTA ATATCCTCAG CATTTGTCAT GAAGGTTATG AAGCGTCTTT GAGAACATCA
GGAATTAGTC TCAAGGAGTT TTTTACTAAT CCTAATATGG CTTTTCCTAT TGTCCATGCC
AGTGTAGATT TTTTGCGTCC GCTATTTTGT GGAGATCAGG TGATAATTAG CTTAGTACCA
CAAAAGATTG GTGCGGAAAA GTTTGAGATT AATTATGAAA TTTATTTGGC GGATGTGTTA
GTGGCTAAGG CTGTAACTCG ACACGTTTGT ATTGATGCTA ATACCAGAAG TAAGCAAGAG
TTATCTACGG AAATTATTCA GTGGTTGGAT GGCTATCGCA AGGAAACGGA GGAGGTGGAA
AGGCGAAAGG CTAGAGAGGT TGTTTAA
 
Protein sequence
MPFTYHRTIH FQDTDAAGVV YFANILSICH EGYEASLRTS GISLKEFFTN PNMAFPIVHA 
SVDFLRPLFC GDQVIISLVP QKIGAEKFEI NYEIYLADVL VAKAVTRHVC IDANTRSKQE
LSTEIIQWLD GYRKETEEVE RRKAREVV