Gene Ava_0382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0382 
Symbol 
ID3682717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp496720 
End bp498309 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content46% 
IMG OID637715710 
Productglycoside hydrolase family protein 
Protein accessionYP_320903 
Protein GI75906607 
COG category[S] Function unknown 
COG ID[COG1543] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCG GCTACGTCGC GCTCGTACTT CACGCACATC TACCCTTCGT TCGTCACCCA 
GAAAGTGACT ACGTGCTAGA GGAAGAATGG CTCTATGAAG CCATCACCGA AACATACATT
CCCTTATTGA AAGTATTTGA GGGCTTAAAG CGAGACGGCA TCGACTTTAA AATTACTATG
AGTATGACAC CGCCTCTTGT GTCGATGCTC CGCGATCCTC TATTGCAAGA ACGCTATGAC
GCACACTTAG CCCAACTCGA AGAATTGATA GAACTGGAAG CCGAACGTAA TGCCCAAAAT
GGACACCTGC GTTACTTAGC TGAACACTAC GCCACTGAGT TTAACGAAGC GCGTCAGATG
TGGGAGCGCT ACAACGGTGA TTTGGTAACA GCTTTTAAGC AGTTCCAAGA TACTAACAAC
CTAGAGATTA TCACTTGTGG TGCTACCCAC GGCTATTTGC CACTGATGAA GATGTATCCC
CAAGCGGTGT GGGCGCAAAT TCAGGTGGCT TGCGAACACT ACGAGGAAAC TTTTGGTCGT
CCACCCAAAG GTATTTGGTT ACCGGAATGC GCCTACTATG AAGGTTTGGA ACGGATGCTG
GCTGATGCTG GTTTACGTTA CTTCCTTACT GATGGGCATG GTATTTTGTA TGCTCGTCCT
CGTCCTCGGT TCGGCACTTA TGCGCCAATT TTTACGGAAA CTGGTGTTGC TGCTTTTGGT
CGAGATCATG AATCTTCTCA GCAGGTATGG TCTTCTGAGG TTGGTTATCC AGGTGCGGCA
GAATATCGAG AATTTTATAA AGATTTGGGT TGGGAGGCTG AGTATGAATA CATCAAGCCC
TACATCATGC CCAACGGTCA ACGTAAAAAT ACAGGTATTA AGTATCACAA AATTACTGGG
CGCGGTTTAG GTTTATCAGA TAAAGCACTA TACGATCCTT ACTGGGCAAG GGAAAAGGCG
GCAGAACACG CGGCTAATTT TATGTATAAT CGTGAACGCC AAGCAGAGCA TCTGTATGGA
ATTATGCAGC GTCCGCCGAT TATCGTTTCG CCCTACGATG CAGAATTGTT TGGTCATTGG
TGGTATGAAG GCCCTTGGTT CATCGATTAC CTGTTCCGCA AGTCTTGGTA CGACCAAGGA
ACTTATGCGA TGACTCATTT GGCAGACTAT TTACGAGCAG AACCGACACA ACAAGTCTGT
CGTCCTTCCC AGTCAAGCTG GGGTTATAAG GGTTTCCATG AATATTGGTT GAATGAAACA
AATGCTTGGA TTTATCCACA TTTGCACAAA GCGGCTGAAC GCATGATCGA AATATCTACC
CTAGAACCAG AAGATGAGTT GGGATGGAGG GCGCTTAACC AAGCAGCAAG AGAACTGCTG
TTGGCACAAT CTTCTGACTG GGCATTTATT ATGCGGACGG GAACAATGGT TCCTTATGCT
GTGAGACGGA CGCGATCGCA CCTCATGCGT TTTAATAAGC TATACGAAGA TGCTAAAGTT
GGCAAGTTTG ACAGTGGTTG GTTAGAAAAA GTTGAGTTGA TGGATAATAT TTTCCCCAAT
ATTAATTATC GGGTTTACCG TCCTTTGTAA
 
Protein sequence
MAIGYVALVL HAHLPFVRHP ESDYVLEEEW LYEAITETYI PLLKVFEGLK RDGIDFKITM 
SMTPPLVSML RDPLLQERYD AHLAQLEELI ELEAERNAQN GHLRYLAEHY ATEFNEARQM
WERYNGDLVT AFKQFQDTNN LEIITCGATH GYLPLMKMYP QAVWAQIQVA CEHYEETFGR
PPKGIWLPEC AYYEGLERML ADAGLRYFLT DGHGILYARP RPRFGTYAPI FTETGVAAFG
RDHESSQQVW SSEVGYPGAA EYREFYKDLG WEAEYEYIKP YIMPNGQRKN TGIKYHKITG
RGLGLSDKAL YDPYWAREKA AEHAANFMYN RERQAEHLYG IMQRPPIIVS PYDAELFGHW
WYEGPWFIDY LFRKSWYDQG TYAMTHLADY LRAEPTQQVC RPSQSSWGYK GFHEYWLNET
NAWIYPHLHK AAERMIEIST LEPEDELGWR ALNQAARELL LAQSSDWAFI MRTGTMVPYA
VRRTRSHLMR FNKLYEDAKV GKFDSGWLEK VELMDNIFPN INYRVYRPL