| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0267 |
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| Symbol | |
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| ID | 3682954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 344482 |
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| End bp | 345159 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637715595 |
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| Product | hypothetical protein |
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| Protein accession | YP_320788 |
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| Protein GI | 75906492 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.567049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACAGTG TAGCTTTATT AACGTTACAA AAATTCAATT GCAATCTTCT ATTAGTAAGA
TTGCGACAGC GAAACCTGAT AGGAAAGCAC CTTTATATAC TTGAATCTAG GAAACTAGAT
GCAGGTTTTA GTTTGGTAGA AATGATCGCA GTTGTACTAA TGATAGGTAT ATTAGCAGCG
ATCGCCCTAC CCAGTTGGTC TGCTTATGTC AACCGCCAAA GAGTTACTAA AGCTAATGAG
GTTGTTTTGT CCGCAATACA AGACGCACAA AGGCAAGCTA AACAAAAAAA ACTGAGCTAC
AGTGTCAGCT TCAAAACAGA CAATAATATC CCGCAGCTTG CAGTTTATTC AGGTACAACA
CCAACTAACT GGCGTAATTT AGGTGAAGAT TTAGACATTA AAACGGGGAC AATGAGACTT
GGCACAAACC TCAGTAACGT AAACACTGCT AGCGCCTCTG TTACCTATGC TGCAAATTTT
AATACTAGCG CCCCACAAAC AATTACTTTC GACTACATGG GGACTTTAGC AAATGCAAAC
TTTGGTACGC CGCCTACGGG TTCAGATGAA GCACCTGGAA TCAAAGTTGT TGTAGCCAAT
AACAACATCA AGCGCTGCGT CATCTTAAAA ACTCTCTTAG GTGCAACACT TACTGATAAA
GATGATAAAT GCAATTAA
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| Protein sequence | MYSVALLTLQ KFNCNLLLVR LRQRNLIGKH LYILESRKLD AGFSLVEMIA VVLMIGILAA
IALPSWSAYV NRQRVTKANE VVLSAIQDAQ RQAKQKKLSY SVSFKTDNNI PQLAVYSGTT
PTNWRNLGED LDIKTGTMRL GTNLSNVNTA SASVTYAANF NTSAPQTITF DYMGTLANAN
FGTPPTGSDE APGIKVVVAN NNIKRCVILK TLLGATLTDK DDKCN
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