Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0251 |
Symbol | |
ID | 3682938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 321106 |
End bp | 323565 |
Gene Length | 2460 bp |
Protein Length | 819 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637715579 |
Product | hypothetical protein |
Protein accession | YP_320772 |
Protein GI | 75906476 |
COG category | [R] General function prediction only |
COG ID | [COG0699] Predicted GTPases (dynamin-related) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0811563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGAGTA TGCCTTCGCA GTGTCATAAT CTAAAAGATC AAGTTGAGTC TATATTGCAG CTTTTACAGG AGGAATTATC TTTGCGATCG CAAGATATCA CATCTGTACA AACTTCTCTA GGTAAGGCGA TTTCCCCCCA GTTTGAAATT GTGTTTGCTG GTGCATTTAG TGCAGGTAAA TCTATGCTGA TTAATGCACT ATTAGAACGG GAATTGTTAT ACAGTGCAGA AGGACACGCT ACAGGTACAG AGTGCAAAAT TGAGTATGCA GAATTAGATA AAGAACGGGT AGTTTTAACT TTTTTAAGTG AGGTAGAAAT TCGGGAACAA GCAAACTCTC TGTGTCAACA GTTGGGATTT ACGACAGCAG TTAATATTAA TCAAGCTGAA GTGGTTAGCT TATTACATCA AGGGTGTGAA GCGATTATTC AGCAAGAAGG TGGTGAGAGT AAATCAGAAC GTGCCAAACA AGCGAAAGCA TTAATATTTT TACTACAGGG ATATGAGGCG AATCGGCAAC ATATTCATAC AGTAAATAAT GCTACATATT CGATGGAACA TTTTAATTTT TCCAACCTGA AAGAAGCGGC TGGATATGCG CGTCGTGGTA GTAATAGCGC CGTATTAAAA CAGATTGAAT ACTTTTGCAA CCATCCGCTT TTGCAAGATG GCAACGTAAT TATTGACACA CCAGGGATTG ATGCACCAGT GGAAAAGGAT GCACAACTAA CCTACGCCAA GATACAACAT CCTGATACTT CGGCGGTGGT GTGTGTGCTG AAACCTGCTT CTGCTGGTGA TATGACGAAA GAGGAAACAG AACTGTTAGA AAAGATGCGG CAAAATGGAG GAATACGCGA TCGCGTGTTT TATGTCTTCA ACCGCATCGA CGAAACTTGG TATAATACCC AACTAAGGCA ACGCTTGGAT GATTTAATCA ACACACAATT CCGAGATACA AGCCGGGTTT ATAAAACCAG TGGGTTACTT GGTTTTTATG GAAGTCAGAT TAAACAGACA AGTACTCAAG ATAGATTTGG TCTAGATTCT ATCTTTGGAG AAAGTGCCAA ATATGTAAAT GGTAACGAGG AAACACCGCA GTTTGTTTAC GCCTTTAATA ACTATTGTGT CAGTTCTGGT AAGTTAGCTT CTAGTAATTT TCGCATTTCT CTCAATGGTT TTGAAACACC GAATCAAAAC TATGTGCGGA TTTTAAGTGA ACAGGGAACA CCTTTAATTA ATCAGTTAAT TCAAGATAGT GGGATTGAAG AATTTCGCAC AGCCGTCACG CGTTATCTAA CTGAAGAAAA GCGTCCCCAG CTTTTTAAAA ATCTTGCTGA TGATTTAGAA GATATTTGTA TTAATCTGAA AAAACATTAT CAGACTGTAC ATCGTGACTT AGATAGTCAG CCCCGTGAAA TTGAGATGAT GAAGGCGCAG GAATTACAAT ATCTCAATCA GCAATTGCAA CAAGTTGGTA AAGATTACAG CCTACACATC ACAGAAGAAG TTAATCATGT AATTAATCAT GCTTGTGACA GATTTGAGAC GGATTTTCGC CAATTGCAAT CCCGGATGAT TCGTCGTTTA GATGAATTGT TGGATACATT TTCTGTAGCT GATGCTTATC GTCGTGCGAC TCTGAGTCAT CCGCGTAATG CTACTGCGCC ATTACTAGCA ATTTTAGTAG AGGCGTTCTA TTATTTGGCG AACCAATTAG AAGATATCTT AGTAGATTCA TCTCAGGAAT TAGTGACGAA TCTTTTCCAA AGGTTGATGG AGAAGATTCG TAAATCAGAA TACTATCGCC AGTTATATCG TTTGCTGGGT AACGATGCAG GGATTGAACA AGAACTCAAA GCTTTAGAAA AACGTGTGAC TCAATCTTTA GTAGATGCAG CTAGTGTAGA ATGCGATCGC TTTGTTAGAG AAAGTCCCAG TTTTTATGAT GAAAATACTT TTTCTATATA TCAATTCCGT CAAACATTGC TGCAAACTTC CCAAAGTTAT GATAGCGAAA GTATGGTAGA AGCAGAGCCA GCAATTAGGC AATTATTAAA GTTAGATTTT GAGCCAAAGG TTTCTCATAC CATTCGTAAA ACCTTCCGTC AAACTATTAA CCAAATCCTC AAAACTCAAT TGTTGCCAAT GGCGAAACAG CAAGGGGATG GAATTTTACA ACAATACCCA CAAGCGAGAC TTTATTTAGA ATCAACACTG CAACAAGAAG CAGAGCAAAA GATTAATAAT AATAACCGTT TACTCGGTGT CGTTGAAGGA AAAGTAGATG TGTATAATAC GGCAATCGCT AATATTAACA ATTGTTTACA AGCGATGCAA TTATATGATT ATTTATTACC TTTAATTAAT CTGGGCGAGT TAACAGTTGT TGATCAGATT GCAGCTAATA ATGGTGTGGT TGTCTCTGAC GGGTTATTGG ATGGAGTGAC GCAGGTTTAG
|
Protein sequence | MSSMPSQCHN LKDQVESILQ LLQEELSLRS QDITSVQTSL GKAISPQFEI VFAGAFSAGK SMLINALLER ELLYSAEGHA TGTECKIEYA ELDKERVVLT FLSEVEIREQ ANSLCQQLGF TTAVNINQAE VVSLLHQGCE AIIQQEGGES KSERAKQAKA LIFLLQGYEA NRQHIHTVNN ATYSMEHFNF SNLKEAAGYA RRGSNSAVLK QIEYFCNHPL LQDGNVIIDT PGIDAPVEKD AQLTYAKIQH PDTSAVVCVL KPASAGDMTK EETELLEKMR QNGGIRDRVF YVFNRIDETW YNTQLRQRLD DLINTQFRDT SRVYKTSGLL GFYGSQIKQT STQDRFGLDS IFGESAKYVN GNEETPQFVY AFNNYCVSSG KLASSNFRIS LNGFETPNQN YVRILSEQGT PLINQLIQDS GIEEFRTAVT RYLTEEKRPQ LFKNLADDLE DICINLKKHY QTVHRDLDSQ PREIEMMKAQ ELQYLNQQLQ QVGKDYSLHI TEEVNHVINH ACDRFETDFR QLQSRMIRRL DELLDTFSVA DAYRRATLSH PRNATAPLLA ILVEAFYYLA NQLEDILVDS SQELVTNLFQ RLMEKIRKSE YYRQLYRLLG NDAGIEQELK ALEKRVTQSL VDAASVECDR FVRESPSFYD ENTFSIYQFR QTLLQTSQSY DSESMVEAEP AIRQLLKLDF EPKVSHTIRK TFRQTINQIL KTQLLPMAKQ QGDGILQQYP QARLYLESTL QQEAEQKINN NNRLLGVVEG KVDVYNTAIA NINNCLQAMQ LYDYLLPLIN LGELTVVDQI AANNGVVVSD GLLDGVTQV
|
| |