| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0226 |
|---|
| Symbol | alaS |
|---|
| ID | 3683029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 288328 |
|---|
| End bp | 290970 |
|---|
| Gene Length | 2643 bp |
|---|
| Protein Length | 880 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637715554 |
|---|
| Product | alanyl-tRNA synthetase |
|---|
| Protein accession | YP_320747 |
|---|
| Protein GI | 75906451 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0013] Alanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.821584 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCAA ACCCGCAGCA CCTGAGTGGT AACGAAATTC GCACCCGATT CCTCGACTTC
TATGCCCAAA GGGGACACCA AATTTTGGCT AGTGCTTCCC TTGTGCCGGA AGATCCAACC
GTGCTGCTGA CGATCGCGGG GATGCTACCA TTTAAGCCGA TATTCCTGGG GCAGCGCACA
CCAGAATTTA AACGGGCGAC AACTTCGCAA AAGTGCATCC GTACTAACGA CATCGAGAAT
GTGGGACGCA CCAAACGGCA TCAAACCTTT TTTGAAATGC TGGGTAACTT CAGCTTTGGT
GACTACTTTA AAGAACAAGC GATCGCCTGG GGTTGGGAAA TCTCCACAGA AGTTTTTGGC
TTACCCAAAG AACGCCTAGT AGTCAGCGTT TTTGAGGAAG ATGATGAAGC CTACGTAATT
TGGCGCGATC AAATTGGTGT AACGGAAGCC AGAATTAAGC GCATGGGTGC AGATGATAAC
TTTTGGGTAT CTGGCCCCAC TGGCCCCTGT GGCCCTTGTT CAGAAATTTA TTACGACTTC
CACCCAGAAC GGGGGGATGA AAATATTGAT TTAGAAGATG ACACCCGGTT TATCGAGTTT
TATAACTTGG TATTCATGCA ATACAATCGG GATGCGTCGG GTAATTTAAC ACCACTGCAA
AACAAAAACA TTGATACCGG GATGGGTTTG GAGAGAATCA CCCAAATCCT GCAACAAGTA
CCGAATAATT ACGAAACTGA CTTAATTTTC CCGATTATCG AGACAGCAGC CAAAATTGCT
GGCATTGACT ACCACAGCAG CGATGAGACT ACCAAAGTTT CCCTGAAGGT GATTGGTGAT
CATGTCCGTT CCGTTGTCCA CATGATTGCT GATGAAATTC GCGCCTCCAA TGTGGGGCGG
GGTTATGTGT TGCGGCGATT AATTCGGCGG GTGGTGCGTC ATGGACGATT GATTGGGATT
AGCGGGGAGT TTATTAACCA AGTAGCCGAA AGAGCGATCG CTCTTTCCGA ATCAGCATAC
CCCAATGTTC GCAAACGGGA AACCGTCATC AAAGCAGAAC TAGAACGGGA AGAAGCTAAT
TTCCTCAAAA CCCTTGATAG AGGGGAAAAA CTCCTAGAGG AAATTATCCA ACAGGTGAAG
AAGCAAGGAC AAACAATTAT TAGTGGTGAA AGTGCTTTCA CTCTTTACGA TACCTACGGC
TTCCCCCTGG AACTAACTCA AGAAATCGCC GAAGAAAACA ACCTCACCGT TGATGAGGAC
GACTTTAATG TCGAGATGCA GAAACAAGTG GAACGCGCTA AAGCAGCCCA CGAAACCATC
GATTTAACTG TGCAAGGTTC CCTCGACAAA TTAGCAGAAC ATATCCACGC TACCGAGTTC
ATCGGTTATA GCCAAGCAAC AGCAACAGCA AAAGTAGAAG TTTTGTTAGT AGATGGTGTT
GTTCAAGAAG AAGCAGAAGC AGGAACCGAA GTACAGATTG TCCTTGACAA AACGCCATTC
TATGCTGAAT CTGGGGGACA AATAGGCGAT CGCGGTTATA TCTCCGGTGA TGGGATCGTT
GTTCAGGTGG AAGATGTCAA AAAAGAATCT GATTTCTTCG TACATTTCGG ACGCATCGAA
CGGGGAACCC TGCGCGTAGG TGATAGCGTC ACCGCCCAAA TTGACCGCGC TGGTCGTCGT
CGCGCCCAAG CGAACCATAC CGCCACCCAT CTATTACAAG CAGCCTTAAA GACCATTGTT
GATGGTGGCA TATCGCAAGC CGGTTCTCTC GTCTCTTTCG ACAGATTGCG CTTTGACTTC
AACTCTCCCC GTGGGTTGAC AGCAGAGGAA ATTCAACAAG TTGAAGAACA GATTAACACC
TGGATTGCTG AAGCCCACTC CGCCAAAATC GAAGTATTAC CCCTAGCTGA GGCGAAAGCC
AGAGGTGCGG TAGCCATGTT TGGGGAAAAA TACGGTGATG AAGTCCGAGT CATAGATTTC
CCCGGCGTAT CGATGGAACT ATGCGGTGGT ACGCACGTAA GTAATACCGC AGAGATCGGC
GTATTTAAGA TTATTTCTGA AGCTGGTGTT GCTTCCGGAG TGCGGCGGAT TGAAGCTGTG
TCTGGACTAG CTGTACTGGA TTACTTGAAT GTGCGGGATA AAGTAGTTAA AGACTTAAGC
GATCGCTTTA AAGTCAAACC CGAAGAACTA CCAGAGAGAA TCACCACTCT GCAAAATGAA
CTGAGAACCA CAGAAAAGCA ACTAGAAACC CTCAAGGGAC AACTAGCGAT CGCCAAATCC
GACAGCCTAC TACAAACAGC AGACACTCTT GGCGACCATA AAATCATAGT TGCCCAATTG
GAAGGCGTAG ACCCAGAATC CTTGAAAAGT GCAGCCGAAC GCCTACTACA AAAAATCGGT
AACGGCGCTG TGGTGTTGGG TTCCGTTCCC GAAGCCGACA AAGTTAGCTT AGTTGCAGCC
TTCAGCCCAG AAGTCAACAA AAAAGGACTA CAGGCCGGTA AATTCATTGG TGCGATCGCC
AAAATTTGCG GCGGTGGCGG CGGCGGTAGA CCAAACCTCG CCCAAGCCGG CGGACGCGAT
GCCAGTAAAC TACCAACCGC CTTGGAACAA GCCCAGAGTG AGTTAAAATC GGCGTTAGGT
TAG
|
|---|
| Protein sequence | MSSNPQHLSG NEIRTRFLDF YAQRGHQILA SASLVPEDPT VLLTIAGMLP FKPIFLGQRT
PEFKRATTSQ KCIRTNDIEN VGRTKRHQTF FEMLGNFSFG DYFKEQAIAW GWEISTEVFG
LPKERLVVSV FEEDDEAYVI WRDQIGVTEA RIKRMGADDN FWVSGPTGPC GPCSEIYYDF
HPERGDENID LEDDTRFIEF YNLVFMQYNR DASGNLTPLQ NKNIDTGMGL ERITQILQQV
PNNYETDLIF PIIETAAKIA GIDYHSSDET TKVSLKVIGD HVRSVVHMIA DEIRASNVGR
GYVLRRLIRR VVRHGRLIGI SGEFINQVAE RAIALSESAY PNVRKRETVI KAELEREEAN
FLKTLDRGEK LLEEIIQQVK KQGQTIISGE SAFTLYDTYG FPLELTQEIA EENNLTVDED
DFNVEMQKQV ERAKAAHETI DLTVQGSLDK LAEHIHATEF IGYSQATATA KVEVLLVDGV
VQEEAEAGTE VQIVLDKTPF YAESGGQIGD RGYISGDGIV VQVEDVKKES DFFVHFGRIE
RGTLRVGDSV TAQIDRAGRR RAQANHTATH LLQAALKTIV DGGISQAGSL VSFDRLRFDF
NSPRGLTAEE IQQVEEQINT WIAEAHSAKI EVLPLAEAKA RGAVAMFGEK YGDEVRVIDF
PGVSMELCGG THVSNTAEIG VFKIISEAGV ASGVRRIEAV SGLAVLDYLN VRDKVVKDLS
DRFKVKPEEL PERITTLQNE LRTTEKQLET LKGQLAIAKS DSLLQTADTL GDHKIIVAQL
EGVDPESLKS AAERLLQKIG NGAVVLGSVP EADKVSLVAA FSPEVNKKGL QAGKFIGAIA
KICGGGGGGR PNLAQAGGRD ASKLPTALEQ AQSELKSALG
|
|---|
| |