Gene Ava_0146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0146 
Symbol 
ID3683285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp195645 
End bp196154 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content46% 
IMG OID637715473 
Productallophycocyanin subunit beta 
Protein accessionYP_320667 
Protein GI75906371 
COG category 
COG ID 
TIGRFAM ID[TIGR01337] allophycocyanin, beta subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATG CAGTAACAAG CTTAATTAAG AATTATGACG TAGCTGGTCG GTATTTTGAC 
CGAAATGCGA TCGATACCCT CAAAGATTAT TTTGACAGTG GTACGGCTCG TGTCCAAGCA
GCCGCCGCAA TTAACTCCAA TGCAGCTGCA CTGGTCAAGC AAGCAGGTTC TAAGTTGTTT
GAAGAGCTGC CAGAGTTAAT TCGTCCTGGT GGTAATGCCT ACACAACTCG TCGTCTAGCG
GCTTGTTTAC GGGATATGGA TTACTACTTG CGCTACGCTA CTTATGCGCT GGTTGCTGGT
AATACCAATG TTTTAGATGA GCGGGTGCTG CAAGGCTTGC GGGAAACGTA CAATTCTTTG
GGTGTACCCA TTGGCCCTAC AGTTCGCGGT GTACAAATTC TCAAGGATTT GGTCAAGGAA
CAAGTTGCAA GTACAGGTAT TGCCAACGCT GCTTTTGTTG AGGAGCCATT TGACCACATT
ACTCGTGAAT TAAGCGAGCG AGATGTTTAA
 
Protein sequence
MRDAVTSLIK NYDVAGRYFD RNAIDTLKDY FDSGTARVQA AAAINSNAAA LVKQAGSKLF 
EELPELIRPG GNAYTTRRLA ACLRDMDYYL RYATYALVAG NTNVLDERVL QGLRETYNSL
GVPIGPTVRG VQILKDLVKE QVASTGIANA AFVEEPFDHI TRELSERDV