Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0089 |
Symbol | |
ID | 3683442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 118326 |
End bp | 119957 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637715416 |
Product | Sodium/hydrogen exchanger |
Protein accession | YP_320610 |
Protein GI | 75906314 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0828946 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATTCA GCATATTGTG GATTTTAATC ATGGGCTTTT TTGCGGGACA ACTTGCCCGC CGCTTAACAG CACCCCCTTT AATTGGGATG ATTTTAGTTG GGATTATTCT TGGCCCTCAA GTCCGTAACC TCATCAGTCA AGATGTGCTT GGTGCTGCGG ATGAATTGAG AACGGTGGCG GTGACAATTA TCCTGATGAA AGCTGGACTG GGATTGGACA GGGAAAAACT GGCTCAACAG GGAAGTGTGG CATTGCGCTT GGGATTTCTA CCTGCAACAA CCGAAGCGAT CGCCATTGCT ATTGCTTCTA TAATTATTTT TAAATTCGAT TTTCCTACTG GTTTACTTTT AGGCTGTGTC ATCGGTGCTG AGTCGCCGGC TGTAATTGTG CCAGGGATGT TGAGGCTGAA AAGTCTAGGC TTGGGAGTCA CAAAAGGAAT TCCCGATGCC ATCTTGACTG GTAGTGCCTT ATCTGATGTC TTGCTATTAC TTGTCTTTAG TTTATTGTTG AATTTCTTAA GTGATGGTGG TGTTGAGCAA ATCACTCTTA TAGGAGGATT TACATTAAAT GCAGTGTATT TACTCCCCAT CCAAATACTC ATGCAAATCG TCTTGGGGTT GTTCTTGGGG TATTTAGCTG CTCGGTTATT AGTTTTGCTA TTAACAAAAC AAAACTGGAC TCAAAATGCC GTTCAAGATA CCGTAATTGC CGCTAGTTTA GCTTTATTTT TAGTAATTAT TGCTAATACT CTACCTTACT TCTCCGGCTA TTTAGCAACA ATGGCGATGG GATTTTTCTT AATTGAATTA GATGCTCCCT TAGCGAGAAG ATTACGCGGC GGATTTGATA GTTTATGGGT AGTAGCGGAG ATTTTTTTGT TTGTCTTGTT GGGGGCAACA ATTCAACTAC AAGTTTTAGA AAACATCTTG CTACCAGGAA TATTAATCCT GTCCATTGGT TTATTTATTG GTCGAATGAT TGGTTGGTAT CTTTCAACTT TGGGGAGTAA TTGGAACTGG CACGAAAGAC TGTTTCTGCT ACCAGGAAAC TCAGCTAAAG CCACAGTGCA AGCCGCCATT GGGGCAATTC CCCTAGCCCA AGGTATTGCG GGAGGAGAGA TAATTTTAGC GATCGCTGTC CTTTCAATTC TCATTACTGC ACCCTTGGGC GCTTGGGCAA CAACTGTCTT TGCACCCAAA TTGTTAAGGA GAGGAGAAGT TGACCCTACA AAAGTGACAA TAGCTACACG TACTTTATTG CTAGCAGCAG TAGATACATC AAGTTTAGCC ATAGAGGTTT TAACCAAAGT TGCAGATTTA GCACGACGCA GTAACGGTGA GGCGATCGTG TTACACGTAG TCAATACCTC GAATCAGCAA GATGTTGAAC AAATACAAGC ACAAGCAAAA CAGCTATTAT CCGATATTAG ATATAAATTC CTCACTATTA CTGGTGCTGT TCCCGAAGAA ATTCTTCGCA TTGCCGAGAC ATATAATGCA ACGGCAATTG TGATGGGAAA ACGAGGGCAT CAACCTTGGG AGAAAGTACT CATCGGCTCA GTCTCCCAAG CAGTCATCGA AAATAGTTCC ATTCCCGTCA TCTTGCTGGA CACCCGGCCG AAAAAAAATT AA
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Protein sequence | MLFSILWILI MGFFAGQLAR RLTAPPLIGM ILVGIILGPQ VRNLISQDVL GAADELRTVA VTIILMKAGL GLDREKLAQQ GSVALRLGFL PATTEAIAIA IASIIIFKFD FPTGLLLGCV IGAESPAVIV PGMLRLKSLG LGVTKGIPDA ILTGSALSDV LLLLVFSLLL NFLSDGGVEQ ITLIGGFTLN AVYLLPIQIL MQIVLGLFLG YLAARLLVLL LTKQNWTQNA VQDTVIAASL ALFLVIIANT LPYFSGYLAT MAMGFFLIEL DAPLARRLRG GFDSLWVVAE IFLFVLLGAT IQLQVLENIL LPGILILSIG LFIGRMIGWY LSTLGSNWNW HERLFLLPGN SAKATVQAAI GAIPLAQGIA GGEIILAIAV LSILITAPLG AWATTVFAPK LLRRGEVDPT KVTIATRTLL LAAVDTSSLA IEVLTKVADL ARRSNGEAIV LHVVNTSNQQ DVEQIQAQAK QLLSDIRYKF LTITGAVPEE ILRIAETYNA TAIVMGKRGH QPWEKVLIGS VSQAVIENSS IPVILLDTRP KKN
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