Gene Ava_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0087 
Symbol 
ID3683440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp116031 
End bp116459 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content44% 
IMG OID637715414 
Producthypothetical protein 
Protein accessionYP_320608 
Protein GI75906312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.233962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0598733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCTG ACAACATCGA AATTATCGAA TCTGTCGAAA TTGTTGAATC TACCGTGGTG 
GTAGAAATTA GTCCTCAAAC TGATGAAATA GTGGAAGCGG AAATGGCTGG CGAAAGTGAC
GAAGTAAAGC GCGAAACTAA AGCGCTGATT GAAGCACTCA GAAGACGCGC GCAAGCTGAA
GCTGAATCAG CAGGAACTTT CACCCGCGAA ACTTACTTAA ACGCTGTTCG GAAGATACGA
GAAAATCTTG ATAGGGAAAG AATTATGGAT CGCAGCGATC GCTTAGAATA CTTTTGGGCT
GTTTTGAAGG ACGAAACCGA AAAAAACTGG CACTTAATGA TGAAAGATTT TGTAGATTTT
AGTGTCCGTC TACAGAATGC CGCCAAAGCC GCCTGGGAAG CCTTCAATGC CCCTCGCCAT
CAAGGTTAG
 
Protein sequence
MNADNIEIIE SVEIVESTVV VEISPQTDEI VEAEMAGESD EVKRETKALI EALRRRAQAE 
AESAGTFTRE TYLNAVRKIR ENLDRERIMD RSDRLEYFWA VLKDETEKNW HLMMKDFVDF
SVRLQNAAKA AWEAFNAPRH QG