Gene Athe_2724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2724 
Symbol 
ID7408294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2876037 
End bp2877263 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content38% 
IMG OID643717081 
Productglycoside hydrolase family 10 
Protein accessionYP_002574550 
Protein GI222530668 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3693] Beta-1,4-xylanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.85294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATAGAT ACAATCATCG AAAAAGCCAG ATGTTATTGA AAATTACCAC AGCTGATGGT 
AAACCCTTGA AAAATGCTGA AATTACAGTT CGTCAAATCA AACACAAGTT TTTATTTGGA
TGTGCAGAAT TTTCAGTTGT TCCTTTTGTA AACGGTGAGT TTTCAGGTGA CTTTAAAGAA
AAAGCTGAAA TGGCTTTTGA AAAATTTGTT GACCTTTTCA ACTTTGCCAC TCTTCCTTTT
TACTGGGGCA GGTTCGAACC TGTCAGAGGA AAACCAGATA CTCAGCGACT CAAAAACGCT
GCCAAGTTCC TTAAAAATGC TGGATTTGTT CTCAAAGGTC ATCCACTTTG CTGGCACACA
GTTACTGCTG ACTGGCTTTT GGAACTTACT AACAACCAGA TTTTAGAAGC ACAGCTTATG
CGTATAAAAC GCGAAGTAAG CGATTTTGCC GGTCTTATCG ATATGTGGGA TGTAATAAAT
GAGGTTGTCA TAATGCCAAA CTTTAATAAA TACGATAATG GAATTACAAG AATTTGCAAA
CAATTTGGCA GGATGGGTCT TGTTAAAATG GTGTTTGACG CGGCAAGAGA AGCTAACCCA
AAAGCTATTT TGCTAATCAA CGACTATATT GTATCAGATG CATATGAAAT ACTGATTGAG
GCGTTGCTTG ACAAAGGTGT GAAGATTGAT GCAATAGGAA TACAGTCGCA CATGCACCAG
GGTTTCTGGG GAGTTGAGAA GACTCAAGAG GTGCTTGAAA GGTTTTCACG TTTTGGTTTG
CCACTTCACT TTACAGAAGT CACATTAATT TCAGGAAAGC TTATGCCTCC ATATATAAAA
GACCTCAACG ACTATAAACC TGAAAGTTGG CCATCAACCG TAGAGTGTGA AGAAAGGCAG
GCAATGGAAG CAACGCTGTT TTATAAAATG CTCTTTGCGC ATCCGCTTGT TGAAGCAATT
ACCTGGTGGA ATTTCATTGA TACTTTTGCT TGGCTTGGCG CACCAGCAGG ATTTATTACA
AAAGACGGAA GGGTAAAACC AATTTATAAT GCTCTTTATA ATCTTATTAA AAAAGAATGG
TGGACAGGCA CACAAAACCT TGTCACAGAC CAGGATGGTT TTGTGAAGGT ATCAGGTTTT
ATGGGCGAAT ATGAAGTATC TTTTAAAGAT AAAAAATCAA AATTTACACT TGACAGGACA
CATGAAGTTG CTCAGATAAT TTTATAA
 
Protein sequence
MDRYNHRKSQ MLLKITTADG KPLKNAEITV RQIKHKFLFG CAEFSVVPFV NGEFSGDFKE 
KAEMAFEKFV DLFNFATLPF YWGRFEPVRG KPDTQRLKNA AKFLKNAGFV LKGHPLCWHT
VTADWLLELT NNQILEAQLM RIKREVSDFA GLIDMWDVIN EVVIMPNFNK YDNGITRICK
QFGRMGLVKM VFDAAREANP KAILLINDYI VSDAYEILIE ALLDKGVKID AIGIQSHMHQ
GFWGVEKTQE VLERFSRFGL PLHFTEVTLI SGKLMPPYIK DLNDYKPESW PSTVECEERQ
AMEATLFYKM LFAHPLVEAI TWWNFIDTFA WLGAPAGFIT KDGRVKPIYN ALYNLIKKEW
WTGTQNLVTD QDGFVKVSGF MGEYEVSFKD KKSKFTLDRT HEVAQIIL