Gene Athe_0433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_0433 
Symbol 
ID7407510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp493729 
End bp494271 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content34% 
IMG OID643714820 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002572338 
Protein GI222528456 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAAA GAGAATTGGT AGAAAAAGCA AAGAAAGACA AGAAATACTT TGAAAAGTTA 
TATGAGATGT ATTTCGACAA GATTTACTCT TACATATACT ATAGAACGTT CAACCATCTT
ATTACAGAAG ACCTGACAAG CGAAACCTTT ATAAAAGTGC TGAGGTCACT TGACAGGTTT
GAATGGAAAG AAAATGGTTC TTTTTCAGCA TGGATATTCC GTATTGCTCA GAATGTTGTA
AATGACTATT ACAGGAACAA AAAAGAATTT GTTGATATTG AGAAAATTTC AGACAGTCCG
TGGATGAAAA ATCCAGAGGA TGAGCTTTTA GATAAAGTTG AGAAAGATAT AATTAAAAGT
GCACTTAAAA AGCTTACAAA GGACCAGCAG GAAGTTGTGA TTCTGCGGTA CGGTGCGAAT
ATGAAATTTC ATGAGATTGC AAAAATAAAA AACAAATCCG ATGTAGCTGT AAGAGCCCTA
TTTTTCAGAG CAATACATTC GCTCAAAGAA ATGCTTTTAA AAGAGGTGCA TGAAAGTGAA
TGA
 
Protein sequence
MDERELVEKA KKDKKYFEKL YEMYFDKIYS YIYYRTFNHL ITEDLTSETF IKVLRSLDRF 
EWKENGSFSA WIFRIAQNVV NDYYRNKKEF VDIEKISDSP WMKNPEDELL DKVEKDIIKS
ALKKLTKDQQ EVVILRYGAN MKFHEIAKIK NKSDVAVRAL FFRAIHSLKE MLLKEVHESE