Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_0433 |
Symbol | |
ID | 7407510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | + |
Start bp | 493729 |
End bp | 494271 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643714820 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002572338 |
Protein GI | 222528456 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGAAA GAGAATTGGT AGAAAAAGCA AAGAAAGACA AGAAATACTT TGAAAAGTTA TATGAGATGT ATTTCGACAA GATTTACTCT TACATATACT ATAGAACGTT CAACCATCTT ATTACAGAAG ACCTGACAAG CGAAACCTTT ATAAAAGTGC TGAGGTCACT TGACAGGTTT GAATGGAAAG AAAATGGTTC TTTTTCAGCA TGGATATTCC GTATTGCTCA GAATGTTGTA AATGACTATT ACAGGAACAA AAAAGAATTT GTTGATATTG AGAAAATTTC AGACAGTCCG TGGATGAAAA ATCCAGAGGA TGAGCTTTTA GATAAAGTTG AGAAAGATAT AATTAAAAGT GCACTTAAAA AGCTTACAAA GGACCAGCAG GAAGTTGTGA TTCTGCGGTA CGGTGCGAAT ATGAAATTTC ATGAGATTGC AAAAATAAAA AACAAATCCG ATGTAGCTGT AAGAGCCCTA TTTTTCAGAG CAATACATTC GCTCAAAGAA ATGCTTTTAA AAGAGGTGCA TGAAAGTGAA TGA
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Protein sequence | MDERELVEKA KKDKKYFEKL YEMYFDKIYS YIYYRTFNHL ITEDLTSETF IKVLRSLDRF EWKENGSFSA WIFRIAQNVV NDYYRNKKEF VDIEKISDSP WMKNPEDELL DKVEKDIIKS ALKKLTKDQQ EVVILRYGAN MKFHEIAKIK NKSDVAVRAL FFRAIHSLKE MLLKEVHESE
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