Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_0121 |
Symbol | |
ID | 7408483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | + |
Start bp | 142983 |
End bp | 143768 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643714529 |
Product | CRISPR-associated protein Cas6 |
Protein accession | YP_002572052 |
Protein GI | 222528170 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.127158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGCAA AATTTATATT TGAAGTACAT AATGGGTTTA ATGAAACCAA GGAACTCCCA GTTTACTATA GAACCTTATT TATGGCTTTT TTAAAAAAAG CGCTATCATC ATACAATGAG GAATATTTCA AAAGGCTTTA TTGGTGGGAG GATAAAAAGA ATAAGTGGCA AAAGCCGTTC GTTTATGCGG TAAATTTGCC CAACATGAAT TTTTCAGACG ATAAAGTGCT GTTCAGGGGA GATATAGTTT TAAACCTTTC AACTTCCGAT TATGAGTTTT TTGTCAATAT CTACAATAGT TTAATCAGCA GCAAACTATA TCCTCATAAA TTGGCTAATA ACTGTGGAAT CAAGCTCAAG AGGGCATACC TTATAAAAGA ACCAGAACAA TTTTCTTCAA CTATGACTTT CAAAACCTTT TCACCTGTGC TGATTGAGAA AAAAGAGGGA GATGAGAAAA TTCCAGTTTT GCCCTATGAT GAAGGATTTG AAGAGGTTTT GAACGAAGTA ATTGACTTTG AAATTAGAAA TCTCAGAATT TTGCGAGGGC AAAATAGAGG ACTTCATAAA AGAATTAGTT TCAGGCCAAT AAATATCAAA AAGATTGTTG TAAAGCATAA AATTTCTGAG TTTGTAGAAA ACACCGGCAA AGAGATTATG TATCTTACAG GCTTTGGCGG TATATTTGAA CTATCAGGAC ATCCTGATGA TTTAAAAGAG ATTTATCAAA ATGGTCTTGG ATTTAGAAGA GGGCAAGGAT TTGGTTTTAT TGAAGTGGTG AGGTAA
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Protein sequence | MRAKFIFEVH NGFNETKELP VYYRTLFMAF LKKALSSYNE EYFKRLYWWE DKKNKWQKPF VYAVNLPNMN FSDDKVLFRG DIVLNLSTSD YEFFVNIYNS LISSKLYPHK LANNCGIKLK RAYLIKEPEQ FSSTMTFKTF SPVLIEKKEG DEKIPVLPYD EGFEEVLNEV IDFEIRNLRI LRGQNRGLHK RISFRPINIK KIVVKHKISE FVENTGKEIM YLTGFGGIFE LSGHPDDLKE IYQNGLGFRR GQGFGFIEVV R
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