Gene Athe_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_0121 
Symbol 
ID7408483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp142983 
End bp143768 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content34% 
IMG OID643714529 
ProductCRISPR-associated protein Cas6 
Protein accessionYP_002572052 
Protein GI222528170 
COG category[L] Replication, recombination and repair 
COG ID[COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 
TIGRFAM ID[TIGR01877] CRISPR-associated endoribonuclease Cas6 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.127158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGCAA AATTTATATT TGAAGTACAT AATGGGTTTA ATGAAACCAA GGAACTCCCA 
GTTTACTATA GAACCTTATT TATGGCTTTT TTAAAAAAAG CGCTATCATC ATACAATGAG
GAATATTTCA AAAGGCTTTA TTGGTGGGAG GATAAAAAGA ATAAGTGGCA AAAGCCGTTC
GTTTATGCGG TAAATTTGCC CAACATGAAT TTTTCAGACG ATAAAGTGCT GTTCAGGGGA
GATATAGTTT TAAACCTTTC AACTTCCGAT TATGAGTTTT TTGTCAATAT CTACAATAGT
TTAATCAGCA GCAAACTATA TCCTCATAAA TTGGCTAATA ACTGTGGAAT CAAGCTCAAG
AGGGCATACC TTATAAAAGA ACCAGAACAA TTTTCTTCAA CTATGACTTT CAAAACCTTT
TCACCTGTGC TGATTGAGAA AAAAGAGGGA GATGAGAAAA TTCCAGTTTT GCCCTATGAT
GAAGGATTTG AAGAGGTTTT GAACGAAGTA ATTGACTTTG AAATTAGAAA TCTCAGAATT
TTGCGAGGGC AAAATAGAGG ACTTCATAAA AGAATTAGTT TCAGGCCAAT AAATATCAAA
AAGATTGTTG TAAAGCATAA AATTTCTGAG TTTGTAGAAA ACACCGGCAA AGAGATTATG
TATCTTACAG GCTTTGGCGG TATATTTGAA CTATCAGGAC ATCCTGATGA TTTAAAAGAG
ATTTATCAAA ATGGTCTTGG ATTTAGAAGA GGGCAAGGAT TTGGTTTTAT TGAAGTGGTG
AGGTAA
 
Protein sequence
MRAKFIFEVH NGFNETKELP VYYRTLFMAF LKKALSSYNE EYFKRLYWWE DKKNKWQKPF 
VYAVNLPNMN FSDDKVLFRG DIVLNLSTSD YEFFVNIYNS LISSKLYPHK LANNCGIKLK
RAYLIKEPEQ FSSTMTFKTF SPVLIEKKEG DEKIPVLPYD EGFEEVLNEV IDFEIRNLRI
LRGQNRGLHK RISFRPINIK KIVVKHKISE FVENTGKEIM YLTGFGGIFE LSGHPDDLKE
IYQNGLGFRR GQGFGFIEVV R