Gene Arth_2193 details

Gene Information

• Locus tag: Arth_2193
• Symbol: def
• ID: 4445237
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Arthrobacter sp. FB24
• Kingdom: Bacteria
• Replicon accession: NC_008541
• Strand: -
• Start bp: 2470421
• End bp: 2471101
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 639690002
• Product: peptide deformylase
• Protein accession: YP_831673
• Protein GI: 116670740
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00150941
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTCACG TAGCCAATCC CACGCCGTTC AGCGCCGCCC GGATCAGGGA AACTGTCCAG 
GAAATCCTCT CCGCAGGCGT CCTTCCCGCC ATTGTCCAGG CCGGCCATCC GGTGCTCCGG 
CAACAGGCTG CCCCGTACGA GGGCCAGCTG GATGGCACTG AACTTGCAGC GCTGATCGCC 
CTGATGCGGG AGGTGATGCA TGACGCGCCG GGCGTCGGCC TGGCCGCACC GCAGCTCGGC 
ATTCCCCTGC AGCTTGCGGT CCTTGAGGAC CAGTACGACG TCGACGCCGA GACTGCCGCC 
GTCCGCCACC GGTCGCCGCT GGAGTTCTTT GCGGTCATCA ATCCGTCATA TTCGCCGCTG 
GGGACCGGCA CTGCGGCGTT TTACGAGGGA TGCCTGTCGC TCCAGGGCCT GCAGGCCGTG 
GTCTCTCGAC ACGAAACGGT CCGCCTCGAC TTCACCGATC CCGGCGGAAC CAGGCGGCAG 
CAGGATTTCT TCGGCTGGCA GGCGCGGATT GTGCAGCACG AGGCGGACCA CCTCCAGGGG 
ATCCTCTATG TGGACAAGGC TGAGTTGCGC TCCCTCAGCA ACAACGCCGA ATACGGTGCC 
CGCTGGGCGC ATCCGGACAT CCGCCTGGCC CGGCAGGCAT TGGGGTTTTT GCCGGGTCAG 
GGTACCGACC AGGGCAACTA G 

 

Protein sequence

MLHVANPTPF SAARIRETVQ EILSAGVLPA IVQAGHPVLR QQAAPYEGQL DGTELAALIA 
LMREVMHDAP GVGLAAPQLG IPLQLAVLED QYDVDAETAA VRHRSPLEFF AVINPSYSPL 
GTGTAAFYEG CLSLQGLQAV VSRHETVRLD FTDPGGTRRQ QDFFGWQARI VQHEADHLQG 
ILYVDKAELR SLSNNAEYGA RWAHPDIRLA RQALGFLPGQ GTDQGN