Gene Arth_1747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagArth_1747 
Symbol 
ID4445716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameArthrobacter sp. FB24 
KingdomBacteria 
Replicon accessionNC_008541 
Strand
Start bp1954312 
End bp1954968 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content61% 
IMG OID639689567 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_831239 
Protein GI116670306 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03003] ectoine/hydroxyectoine ABC transporter, permease protein EhuD 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.136273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTGGG ATAACAATTT TGCGATTTCC GTTCTCCCGG TCCTGTTGCA GGGCCTCTGG 
ACCACGGTTC ACATCACCGT GATGGGAACG CTTTTGGCGG CCGGCTTGGG GCTTGTCTTC
GCTGTTCTCC GAAGGCTTGC CATACCCGTG GTGTCACCGG TGGTTTCCTT CCTGGTGGTG
TTTGTCCGCG GCACGCCGCT GCTGGTGCAG GCCTACGTTG CATTCTTTGT GCTGCCTGCC
TACGGCGTCA GTTTCGATGC ACTCACCACC GGCATTGTGG TGATCGGCAT CAATTACAGC
GCTTACATGG CGGAGGTCTA CCGCAGCGGC ATCCAGGGTG TTCCTACCGG CCAATGGGAA
GCGGCGACGG CGCTCAGCCT CCCCGGTTCC CGGACCTGGG GCCGCATCAT CCTGCCACAG
GCCATCCGGA CCGTGGTCCC GATGCTCGGC AACTACCTCA TCCAGATGTT CAAGGACTCG
GCAGTCCTGT CCGCCATCAC GGTGGTTGAA CTCATGGCAA CAGCCCAGGC CATCGGAAGC
TCAAGCTTCC GTTACCTGGA ACCCCTCACC CTCGCAGCGC TGCTGTTCCT GGCAGTCAGC
TACCCGGCCT CCCGGCTGGT CAACAGATTG GAGCGGCGCT ATGCGCCCCA GCACTGA
 
Protein sequence
MIWDNNFAIS VLPVLLQGLW TTVHITVMGT LLAAGLGLVF AVLRRLAIPV VSPVVSFLVV 
FVRGTPLLVQ AYVAFFVLPA YGVSFDALTT GIVVIGINYS AYMAEVYRSG IQGVPTGQWE
AATALSLPGS RTWGRIILPQ AIRTVVPMLG NYLIQMFKDS AVLSAITVVE LMATAQAIGS
SSFRYLEPLT LAALLFLAVS YPASRLVNRL ERRYAPQH