Gene Apre_1755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1755 
Symbol 
ID8368670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013164 
Strand+ 
Start bp14149 
End bp14823 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content26% 
IMG OID644984686 
ProductABC transporter related 
Protein accessionYP_003142337 
Protein GI256821138 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0195851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAAAAA TAATTAAAAT AAAAAATCTT TATAAGAGTT ATGGTAAAGG TTCAGTAAAA 
AATGAAGTTC TTAAAGATAT AGATTTAAAT ATTAATGAAG GTGAATTTGT TTCTATAATG 
GGAAAATCTG GATCTGGAAA GTCTACACTT TTAAATATAA TAGCTACTAT AGAAAAACCG 
GATAAAGGTC AGATAGAAAT TGATGGAAAC AATATAGAGA AACTTAGTTT AAAAAAGGCA 
AATGACTTTA GAAGAAAATA TTTAGGTTTT ATTTTTCAAG ATTTTAAATT AATTGAATCT 
ATGAATGTTA AAGAAAATAT TGCAGTTCCA CTATTATTAA AAAACGAAAA GCCTAATACT 
ATAAATCAAA AAATAGACAA TATCTTAAAA AAATTAAATA TAGAATACTT AAAAGATAAA 
AACTCTTATG AAATATCTGG TGGAGAAAAA CAAAGAGTTG CTTGTGCAAG AGCACTTATA 
GGTAATCCTA AGATTATACT GGCCGATGAG CCAACGGGGG CTTTAGATTC TAACTCTGCT 
GAAAATTTGA TGAATCTTAT AAAAGATATA AATAAAAAAT TTAATACTAC AGTGCTTTTA 
GTTACTCATG ATAAAAATGT AGCCGAGTAT GGAGATAGAA TTATAACAAT AAAAGATGGA 
GAAATAGAGG GATAA
 
Protein sequence
MEKIIKIKNL YKSYGKGSVK NEVLKDIDLN INEGEFVSIM GKSGSGKSTL LNIIATIEKP 
DKGQIEIDGN NIEKLSLKKA NDFRRKYLGF IFQDFKLIES MNVKENIAVP LLLKNEKPNT 
INQKIDNILK KLNIEYLKDK NSYEISGGEK QRVACARALI GNPKIILADE PTGALDSNSA 
ENLMNLIKDI NKKFNTTVLL VTHDKNVAEY GDRIITIKDG EIEG