| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1638 |
|---|
| Symbol | |
|---|
| ID | 8398450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1780372 |
|---|
| End bp | 1781424 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644996002 |
|---|
| Product | SufBD protein |
|---|
| Protein accession | YP_003153380 |
|---|
| Protein GI | 257067124 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.822468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGAA TTAACGAAAT GAGAATGCCA ACTTGGGCAA GTCTCGGACT AAATTATTTA
AAAGAAGATA AAATCAATAT AGAAAATATA GAAGAAAGCT CCAAGGCAGA AAACTTATCA
GAAATAAGCG AAGTAGAAGA AGCCTTTGCA GGCCACAAGG TCGGAATTTC TGAAAAAATC
GAAAAAGAAA ATAAAGATTT CAGAAACAGA TCCTATGCCT TCGATGTTAA GGGAGAAAGA
GAAACTGAAT TTATCAATTT TGACCTAAAG AAGGACGACA ATATCCTAGT TTCTAACATC
GATATCAAGG CGAGTGAAGC TAGCAGGTCA TCATTTTTGA TAAATATCTT CGATGATGGT
TCAGAGAAAA TCTTTCTTAA CTCAAGAATT AGGGCCAAAC TTGATAAGAA TTCCTATGTC
AAAATTGTCG TAGTCACAAA TCTAGGAAAA GATGCTACAA ACCTAAACTC TATTGGAACT
TACCTTGCCG AAGACGCTAT ATTAGATATC ACTTATATAG AAGTTGGAGC TGGCAAGAGT
CTTGTAAATA TCGACAATAT CCTTAAGGGA GATAGGTCTA AGGTCATCCA AAAGGGAGTA
TACTTCAAAG AAGGAGATGA TTTCCTAGAT ATTTTAGCTA CTAACGAGCA CTTCGGAACA
GACACTGACT CAGAATGTAT GTTCAACGGT GCCCTAAAGG ATAGGGCTGA GAAGAATTTC
AAGGGAGTAG TTGACCTAAG AAGAGGCTGC CACAAGGCGG ATGGTAAAAT TGGTGATTAT
TCTATGATGC TTTCAGATGA TGTAATCAAT AAGTCTGCCC CAATCCTTCT AAACGAGGAA
AGGGAAGTTG CTGGAAACCA CGCAGCAAGC GTAGGTAGAC TAAATAAGGA AATGCTATTT
TACATCATGA GCCGTGGTTT TAGCAAGAAA CAAGCCGAAG CTATGATGCT TGAAGCAAAC
TTCGCTCCAG CTATTGATAA TATAGAAGAT GAAGCTTTAA GAGATAAAAT TAGAGCGAAA
GTTCACAAAA TGAACCTAGG ATACGATTTA TGA
|
|---|
| Protein sequence | MARINEMRMP TWASLGLNYL KEDKINIENI EESSKAENLS EISEVEEAFA GHKVGISEKI
EKENKDFRNR SYAFDVKGER ETEFINFDLK KDDNILVSNI DIKASEASRS SFLINIFDDG
SEKIFLNSRI RAKLDKNSYV KIVVVTNLGK DATNLNSIGT YLAEDAILDI TYIEVGAGKS
LVNIDNILKG DRSKVIQKGV YFKEGDDFLD ILATNEHFGT DTDSECMFNG ALKDRAEKNF
KGVVDLRRGC HKADGKIGDY SMMLSDDVIN KSAPILLNEE REVAGNHAAS VGRLNKEMLF
YIMSRGFSKK QAEAMMLEAN FAPAIDNIED EALRDKIRAK VHKMNLGYDL
|
|---|
| |