Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1589 |
Symbol | |
ID | 8398401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1726531 |
End bp | 1727874 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644995953 |
Product | branched-chain amino acid transport system II carrier protein |
Protein accession | YP_003153331 |
Protein GI | 257067075 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1114] Branched-chain amino acid permeases |
TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAT TATCAAGAAG TCAATTTTTA CAAGTGAGCA TAATGCTTTT CGGTCTGTTC TTTGGAGCAG GAAACTTAAT CTTCCCACCT TTATTGGGTA ATATGGCAGG AAAAGCAACA TTTATTTCTC TATTAGCCTT TAGCGTTACT GCTGTAGTAT TTCCTGTATT AGGAGCCATA GTAGTAGGAA AAACTAATGG TCTATCTAAC TTGGCTAATA GGGTAGGTCC AGTATTCGCC CTAGTTTTCA CGACAGCTAT ATATCTATCA ATAGGACCAG GACTCGGTAT ACCAAGGGCA GGATCAGTTC CTTTCGAGAT GGCCATAGCT CCATACATAC CAAAATCTTT TAATATGAAT CTAATAAGAT TAGTTTATAC TTTCGTCTTC TTTGCTATAG CCTTAGTAAT ATGTCTAAGA CCAAATAAGC TTGTCGAAAG AGTAGGTAAG TTTTTAACTC CAGCCCTCCT ATTATTGATA ACATTTATGT TCTTCAAGAT AGTGACAATG GATAAAAGCC TTGCAGCTCC AACAGGAGAA TATCTAACAG CTCCACTTAC AAAAGGATTC TTGGCAGGTT ATGATACAAT GGATGCCGTA GCAGCCCTTA ACTTCGGTTT TGTAATAGCC CAAGCTATAA GAAGATTTGG TATAGATGAT GAGAAAGAAG TTACGAGATA TGAGGTAAAG GCAGGACTTG TTGCAGGTAG TGTATTGTTT TTGGTTTACT CTATGCTAGC AAGTATAGGT ATGATAGGTA GTGCTAAGTT TGTAGGTCTT GAAAATGGTG CTCAAGTTCT TACAGAATCT ATAAAACTTG CCCTTGGAGA TTTCGGTCTA GTTCTACTAG CCTTCATATT CACCCTAGCT TGTCTTACAA CTTGTGTTGG CCTAATAAGC TCTGGTGGAG AATATTTCGA GAAGCTATTT AACGATAGAC TATCCTACAA GGCTTGGGTA TGTATATGGA CCCTATTCTC ATTCATAATG GCAAACTTCG GCCTAAACAA ACTCCTTGAG TTCTCTGTAC CATTATTACA AATAATATAT CCAGTTGCCC TAGTTCTCAT AGTTATGGGA ATAAGCCAAA GCTTCCTAAA CTTTACTAGA GAATCCTACC TTGCAGCAGC TGCTGTATCA GTTGGACTTC CTTTAGTAGA AGTAATGGAT AAAACCTTCC ACCTAAGCCT TGGACCTGTA ACAAGCCTAG TACAAGGCCT ACCAATGTAT GACACAGGCC TATCTTGGCT CCTACCAACT GTAATAGTAG TTGCATTGAC AAGCCTTTTT GTTAAAGTAT TTGTTAAAGA AGTAGAAGTA AAAAAAGTTA GACAAAAATA TTAA
|
Protein sequence | MKKLSRSQFL QVSIMLFGLF FGAGNLIFPP LLGNMAGKAT FISLLAFSVT AVVFPVLGAI VVGKTNGLSN LANRVGPVFA LVFTTAIYLS IGPGLGIPRA GSVPFEMAIA PYIPKSFNMN LIRLVYTFVF FAIALVICLR PNKLVERVGK FLTPALLLLI TFMFFKIVTM DKSLAAPTGE YLTAPLTKGF LAGYDTMDAV AALNFGFVIA QAIRRFGIDD EKEVTRYEVK AGLVAGSVLF LVYSMLASIG MIGSAKFVGL ENGAQVLTES IKLALGDFGL VLLAFIFTLA CLTTCVGLIS SGGEYFEKLF NDRLSYKAWV CIWTLFSFIM ANFGLNKLLE FSVPLLQIIY PVALVLIVMG ISQSFLNFTR ESYLAAAAVS VGLPLVEVMD KTFHLSLGPV TSLVQGLPMY DTGLSWLLPT VIVVALTSLF VKVFVKEVEV KKVRQKY
|
| |