Gene Apre_1524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1524 
Symbol 
ID8398336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1660938 
End bp1661915 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content39% 
IMG OID644995888 
Productprotein of unknown function DUF1002 
Protein accessionYP_003153266 
Protein GI257067010 
COG category[S] Function unknown 
COG ID[COG4086] Predicted secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.759287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAGA AAATTCTAGC AGGGCTTATG TCCCTTATAA TCCTTCTCCC AAATCTTGCT 
ATGGCAAGTG ACTTTGATCC CAAAAAGGAC GACGTAATCT ATGGAGTAGC CCTAACAGAA
GATGAGAAGG CTACAGTAAA TAAGTCTATG GGAGTTAGGG AAGATTCTAA TATTTCCTAT
GTTGATGGAA GTGATTTAGA AAAATATCTA GGCTACGGAA CAGCAGATTC TAACATGATA
TCTTCAGTCC TAGTCAAAAG ATCTACCAAG GCTAAGGGAA TTTCTGTAAA GATCAAGACA
CCAGGAAATA TTACGGAGAT TACAGAAGGT CAATACACTA ATGCTGCAAT CACAGCAGGC
ATAAGTAATG CGGATATAAT AGTAGCAAGC CCAAGACCTG TTACTGGAGA GTCTGCCCTA
GTCGGAGTCT ACAAATCTGA AGAAATGCGA GGAGTGGACC TTGACACTCA AAGGACTCAA
ACAGCCCAAG AAGAGCTTGA GACAGTAAGC GAAGTTGCAA AAGAAAACCA AGGAAAAGAA
AACTTCGATA CCGATAAGCT CGATACAGTA GTAATTGAAG TAAAACAAAA ACTTAGCGAT
TACAAGAAAG AAAATGGCGA GAATGCATCC GCAGATCAGA TAGCAATCTA CATCAGGGAT
GCCCTAAATA ATGTAAATAT GGACAATGTA TTATCAAATA ACAACATCCA AATCCTAGTT
AATTACTTTG AAAATTACCA AACAACTTCT GCCATAGATA GCGCCGAAGT TAGGGAAAAT
CTCACAAAAC TTGCAGGAGA TATCACAAGT AAGGCCGGCA AGTTCTATGA AGATAACAAG
GATAATATAG ATAAGGTTGC CCAAGAAGCC AAAGACAGCG GCCTATGGGA TTCCATAGTA
GAATTCTTTA GATCGATATT TGAGTCCATA ACAAATGCCT TTAACGGGTC TAGCGAAGAT
GGATCTAGCG AAAACTAA
 
Protein sequence
MFKKILAGLM SLIILLPNLA MASDFDPKKD DVIYGVALTE DEKATVNKSM GVREDSNISY 
VDGSDLEKYL GYGTADSNMI SSVLVKRSTK AKGISVKIKT PGNITEITEG QYTNAAITAG
ISNADIIVAS PRPVTGESAL VGVYKSEEMR GVDLDTQRTQ TAQEELETVS EVAKENQGKE
NFDTDKLDTV VIEVKQKLSD YKKENGENAS ADQIAIYIRD ALNNVNMDNV LSNNNIQILV
NYFENYQTTS AIDSAEVREN LTKLAGDITS KAGKFYEDNK DNIDKVAQEA KDSGLWDSIV
EFFRSIFESI TNAFNGSSED GSSEN