| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1316 |
|---|
| Symbol | |
|---|
| ID | 8398108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1409855 |
|---|
| End bp | 1410340 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644995663 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003153060 |
|---|
| Protein GI | 257066804 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.54085 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAT TTAAGACCTT TATATTATTA CTAGTATCAT TTATCCTCCA AACATCTGTA
TTTTCTAAGA TAGATATATT TGGAGCAAAT GTCAATATCT TCATACCTGC TATAGTTGTC
CTATCTCAAT TTTTGGGAAG AAAGACAGGA AGTATAAGCG GCCTAGTCCT AGGACTTGTG
GAGGACTTCC TCCTAACACC ATTTTTTGGG GTAAGGGCTC TTTCATACTA TCTAATAGGA
TATATCGTAG GAGAAGTGAA AGTTCCAAAG GTTAAGTCAA GTGGAGTCTT AGTTACAGCT
ATAGCAAGTC TAGGAAGCTT CCTTCTAATA TCCTTGATAT ATTTTATCCT AGGAAAGCCT
GGGGCTGATA TATTAAATTA CTTGCCTTTA GCCCTAATCA CAGAAATTGT CCTAAACAGT
CTAGTTTATC TAATTTACAA TATTATAGTT AAGAAAATCA TGTACATTCC AACCTACAAA
ATATAA
|
|---|
| Protein sequence | MNKFKTFILL LVSFILQTSV FSKIDIFGAN VNIFIPAIVV LSQFLGRKTG SISGLVLGLV
EDFLLTPFFG VRALSYYLIG YIVGEVKVPK VKSSGVLVTA IASLGSFLLI SLIYFILGKP
GADILNYLPL ALITEIVLNS LVYLIYNIIV KKIMYIPTYK I
|
|---|
| |