| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1002 |
|---|
| Symbol | |
|---|
| ID | 8397789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1073880 |
|---|
| End bp | 1076459 |
|---|
| Gene Length | 2580 bp |
|---|
| Protein Length | 859 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644995350 |
|---|
| Product | ATP-dependent chaperone ClpB |
|---|
| Protein accession | YP_003152751 |
|---|
| Protein GI | 257066495 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCA ACAAATTCAC ACAAAAATCT CAAGAAGCCA TTAATGACGC TCAAGCAATG
GCTATCAAAA ATTCAAATCC AGAAGTAAAC GAAATGCATT TGGCTTATGC TTTGGTTAAC
AATTCAGACT CTATTGTTAG TCAAATAATC AAGTCAATGG ATGTAGACTA CGAAGGCTAC
AGAAATGAAC TTATCAAAAA GGTTGACTCT ATGCCAAGTC AGTCTGGTAA CTCAAATACT
TACCCAAGTC AAGTATTCCA AAGAATCCTT CTAAAGGCAG AAGATGTAGC TAAAGAAATG
GGAGATAGTT TTGTATCAAC TGAACATATC TTCCTAAGTC TCTTGAAGGA AAAAACCGAA
TTAGATTCCA TCAATAAGAA ATTTGCCATA AGTGCAGTTA GCTTTAAAAA CTCTATCCAA
AATGTCAGGA AAGGTCAAAA AGTTACTAAT GATAATCCTG AAGAGACTAC TAATCCACTA
GAAAAGTTTG GTAGAAACCT AACCCAAGAA GCTAGAGAAG GTAAAATTGA TCCAGTTATT
GGAAGAGATA GGGAGATTAG AAACGCTCTA AGGATTCTTT CTAGAAGAAA GAAAAATAAC
CCAGTCCTAA TCGGACAACC TGGTGTAGGT AAGACTGCAA TTGTAGAAGG ACTTGCCCAA
AGGATTGTCA ATAACGACGT CCCAGAACCA ATCCAAGGAA GGACTATATT CTCACTCGAT
ATGGGTTCTC TTGTAGCAGG AGCAAAATAT AGGGGACAAT TTGAGGAAAG ATTAAAGGCT
GTAATCGATG AGGTCCAAAA GTCAGATGGA CAAATAATAA TGTTCATTGA CGAAATTCAC
AATATTGTTG GAGCTGGTAA GTCTGAGGGG GCTATGGATG CTTCAAATAT CATGAAGCCA
ATGCTAGCTC GTGGAGAGAT TAAAGTCATA GGTGCTACTA CCCTTAACGA GTATAGGCAA
TATATAGAAA AAGATGGTGC CTTGGAACGT CGTTTCCAAA AGGTCATGGT AGAAGAGCCA
TCTGTAGAAG ATACAATAAG TATTCTTAGA GGTATCAAGG ATAAGTATGA AATCTTCCAT
GGAATAAGAA TCCAAGATAG CGCAGTAATT GCAGCTGCAG AATTATCTGA TAGATATATT
TCAGATAGGT TCTTACCAGA TAAGGCCATA GACTTAATGG ATGAAGCCTG TGCGACAGTT
AGAACAGAAA TTGACACCAT GCCTAGCTAT CTAGATGAGC AAAAGAGAAA ACTTCTACAA
TTACAGATAG AAATTACTGC TCTTAAAAAA GAAGATGATG AATATTCTAA GAAGAGACTT
AAGGAATTAG AAGAAGACTT GGCAAACCTA TCAGAAAAAT ATGATGAAGA ATTTCTAAAA
TGGAAAGATG AAAAATCTGC CATAGACGAT GTTAAGAATA TTAAGGAAGA GATTGATAGG
GTAAAGGTTG AAATTGAAAA TGCCGAAAGA AACTATGATT TCGAAAAGTT ATCTGAACTA
AAATATGGAA AGCTTGAAGA ATTAAAGAAG AAATTGGAAG AGAAGAATTC TGGTGAAAAT
ACTGATTCTT CGATCAAAGA GGAAGTAACC GACGAAGATG TTGCAGATGT AGTGAGCAAC
TGGACAAATA TACCAGTTAA TAAGCTTGTA GAAAGCGAAA GGAGCAAAAT CCTCCACCTT
CCAGAAAAGC TACACCAAAG AGTAATCGGC CAAGATGAGG CAATAAGAGC AGTATCAGAT
GCTATTATAA GAGCAAGATC TGGACTTAAG AGTCAAAGTA AACCTATAGG TTCCTTTATC
TTCCTAGGTC CAACTGGAGT TGGTAAGACA GAGCTTGCCA AGGCCTTAAC CGAAGCAATG
TTTGATGATG AGAGAAACAT GATTAGAATT GATATGAGTG AATATATGGA AAAATATTCT
GTGTCAAGAC TAATCGGTGC AGCTCCTGGA TATGTTGGCT ACGAAGAAGG CGGCCAATTA
ACAGAAGCGG TTAGACGCAA ACCTTACTCA GTAATCCTTT TTGACGAAAT TGAAAAAGCC
CATCCAGATG TATTCAACAT ATTATTACAA GTTTTAGATG ACGGAAGACT AACTGATTCC
CAAGGAAGAA CTGTAGATTT TAAAAATACT ATAATCATCA TGACAAGCAA TATAGGTTCT
GAATACTTGA TAGATGGCCT AAATGATGAT GGAAGTATTG ATGAAGAAAA TAAAGACAAG
GTAGATGTAA TCTTAAGAAA TTCCTTCAAG CCAGAATTTC TAAATAGAAT TGACGATATA
GTGATGTTTA CTCCACTTAC AAGTGAACAA GTCTACGAAA TAATCGACCT TCAAATAGCT
GACATTAGAT CTAGGCTAGA AGACAAAGAT ATAAATCTAG AGATTTCAAA TGCTGCTAAG
GAATATATCT TGGCTAATGC ATATAATATC GAGTACGGTG CAAGACCTGT CAAGAGATTC
TTACAAACTC ATGTAGAAAC AGAACTAGGT AAGTTAATTA TCGAAGGAAA AGTTGCTGAA
AAAGATACAG CATTATTAGA TTTAGATGAA AATAATAAAT TAATATTTAA AATAAAATAG
|
|---|
| Protein sequence | MDINKFTQKS QEAINDAQAM AIKNSNPEVN EMHLAYALVN NSDSIVSQII KSMDVDYEGY
RNELIKKVDS MPSQSGNSNT YPSQVFQRIL LKAEDVAKEM GDSFVSTEHI FLSLLKEKTE
LDSINKKFAI SAVSFKNSIQ NVRKGQKVTN DNPEETTNPL EKFGRNLTQE AREGKIDPVI
GRDREIRNAL RILSRRKKNN PVLIGQPGVG KTAIVEGLAQ RIVNNDVPEP IQGRTIFSLD
MGSLVAGAKY RGQFEERLKA VIDEVQKSDG QIIMFIDEIH NIVGAGKSEG AMDASNIMKP
MLARGEIKVI GATTLNEYRQ YIEKDGALER RFQKVMVEEP SVEDTISILR GIKDKYEIFH
GIRIQDSAVI AAAELSDRYI SDRFLPDKAI DLMDEACATV RTEIDTMPSY LDEQKRKLLQ
LQIEITALKK EDDEYSKKRL KELEEDLANL SEKYDEEFLK WKDEKSAIDD VKNIKEEIDR
VKVEIENAER NYDFEKLSEL KYGKLEELKK KLEEKNSGEN TDSSIKEEVT DEDVADVVSN
WTNIPVNKLV ESERSKILHL PEKLHQRVIG QDEAIRAVSD AIIRARSGLK SQSKPIGSFI
FLGPTGVGKT ELAKALTEAM FDDERNMIRI DMSEYMEKYS VSRLIGAAPG YVGYEEGGQL
TEAVRRKPYS VILFDEIEKA HPDVFNILLQ VLDDGRLTDS QGRTVDFKNT IIIMTSNIGS
EYLIDGLNDD GSIDEENKDK VDVILRNSFK PEFLNRIDDI VMFTPLTSEQ VYEIIDLQIA
DIRSRLEDKD INLEISNAAK EYILANAYNI EYGARPVKRF LQTHVETELG KLIIEGKVAE
KDTALLDLDE NNKLIFKIK
|
|---|
| |