Gene Apre_0811 details

Gene Information

• Locus tag: Apre_0811
• ID: 8397595
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaerococcus prevotii DSM 20548
• Kingdom: Bacteria
• Replicon accession: NC_013171
• Strand: +
• Start bp: 904410
• End bp: 904874
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 644995157
• Product: single-strand binding protein
• Protein accession: YP_003152560
• Protein GI: 257066304
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000000022437
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAG TGATATTAAT CGGTCGCATT GCAAAAGATT TTGATTTAAG ATATACGCCT 
AATGGAAGCC CGACTTGTAG CTTTACTTTA GCGGTAGATA AAAAGATGGC AAAACAAAAG 
AAACAGGAGG CGGAGGCCCA GGGTAAGCCT ACCGCCGACT TTCCCAGAAT AGTTGCATGG 
GGAAAACAAG CGGAGAATGC AAGTGCTTAT TTAAGTAAGG GAAGTCAGTG TGCTGTAGAA 
GGGAGAATAC AGACAGGATC ATATCAAGAT AAAGAAACAG GTAAGACCGT TTACACTACA 
GATATATTAG CAGATAATAT AGAGTTCTTA AGTAGTCAAA ATAACGCACA GAATAGCATA 
GGTAAGGAGA AAAGACAAAG TAGGGACAAT TACACTAGTA ACGATGGGGA TTTCTTCGAA 
GAGGATTTTG AAGAGGTACA AGACGACGGA AGGATCCCAT TTTGA 

 

Protein sequence

MNKVILIGRI AKDFDLRYTP NGSPTCSFTL AVDKKMAKQK KQEAEAQGKP TADFPRIVAW 
GKQAENASAY LSKGSQCAVE GRIQTGSYQD KETGKTVYTT DILADNIEFL SSQNNAQNSI 
GKEKRQSRDN YTSNDGDFFE EDFEEVQDDG RIPF