Gene Apre_0618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0618 
Symbol 
ID8397398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp719537 
End bp720580 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content41% 
IMG OID644994975 
ProductrecA protein 
Protein accessionYP_003152381 
Protein GI257066125 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.186792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAG ATAAGCAAAA GGCCTTAGAC CAGGCTTTTA AAAATATAGA GAAAAAATAC 
GGTAAGGGAG CTATAATGAA GATGGGTGAA GCTCCTAGAG TTTCAGTATC TGCTATTCCA
ACTGGAGCAG TCAATCTCGA TATAGCTTTA GGTATCGGCG GAATTCCTAG AGGAAGAGTA
GTTGAAATTT TTGGACCTGA ATCATCCGGT AAGACAACCC TTGCCCTTCA TATAGTTGCA
GAAGATCAAA AGCAAGATCA GACCTGTGCT TTTATCGATG CCGAGCACGC CCTAGATGCA
GAATATGCAG AAAACTTGGG AGTTGATATA GATAACCTAA TCCTCTCTCA ACCAGATACT
GGAGAGCAAG GTCTGGATAT AGCTGAAAGT CTTGTAAGAA GTGGAGCGGT TGACCTAATA
GTAATCGACT CAGTTGCAGC CCTTGTCCCT AGAGCAGAAA TCGAAGGAGA GATGGGTGAT
AGCCACGTCG GTCTTCAAGC GAGACTTATG AGTCAAGCCC TTAGAAGACT AACCGGTGTA
ATTGCAAAAT CAAACACAAC AGTGATTTTT ATCAACCAAT TAAGAGAAAA AGTCGGAGTT
ATGTTTGGAT CTCCTGAGAC AACACCAGGT GGTCGTGCCC TTAAGTTCTA CTCATCTGTA
AGACTTGACA TCAGAAGGAT AAAGACAATA ACCCAAGGAG ATAATTCTAT AGGATCAAGA
ACTAGGGTTA AGGTTGTCAA AAACAAGGTA GCTCCTCCAT TCAAGGTAGT AGAATTTGAT
ATCATGTATG GTAAGGGAAT TTCTAAATCT GGAGTATTGC TCGATACGGC TGTAGATATG
GACATAGTTG ATAAGGCAGG ATCTTGGTTT TCTTACAAGG ACGAAAAGCT CGGCCAAGGT
AGGGAGAATG TCAAAGACCT CTTAGAAGAA AATCCAGAAC TTATGGCCCA AATCGATGCA
GAGGTTAGAA AAAGCATAAT CCAAGCCCAA GAGGATGGAG AGGAAAATAC AGAAGAAGAC
AAAAAAGAAG AAGAAAAGAA ATAA
 
Protein sequence
MDKDKQKALD QAFKNIEKKY GKGAIMKMGE APRVSVSAIP TGAVNLDIAL GIGGIPRGRV 
VEIFGPESSG KTTLALHIVA EDQKQDQTCA FIDAEHALDA EYAENLGVDI DNLILSQPDT
GEQGLDIAES LVRSGAVDLI VIDSVAALVP RAEIEGEMGD SHVGLQARLM SQALRRLTGV
IAKSNTTVIF INQLREKVGV MFGSPETTPG GRALKFYSSV RLDIRRIKTI TQGDNSIGSR
TRVKVVKNKV APPFKVVEFD IMYGKGISKS GVLLDTAVDM DIVDKAGSWF SYKDEKLGQG
RENVKDLLEE NPELMAQIDA EVRKSIIQAQ EDGEENTEED KKEEEKK