Gene Apre_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0539 
Symbol 
ID8397316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp624147 
End bp624803 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content38% 
IMG OID644994897 
Productcarbohydrate kinase, YjeF related protein 
Protein accessionYP_003152306 
Protein GI257066050 
COG category[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGTAG TAGATAGTAA GACTATGAAA AAAATTGACC AATATGCCAT AGATGTACTT 
AAGGTTCCTT CGATTTGCTT AGTAGAAAGG GCAGCCCTTG CTGTGATTAA AAATATTAAT 
CTCGAAAAAA GGACCTCCTT TGCTATTGTA GTAGGAGTAG GAAACAACGG AGCAGATGGC 
CTTGCTATTG CAAGAAACCT GCTAGCTATG GGAAAGTATG TAGAAATCTA TATAGTGGGC 
GATCTTACTA AACAAAGTCA AGACTTTAAA CTAAATCTTG ATTCTTGCAA GCGTCTTACA 
GATAAAATCT TTGAGCCAAA AAGCATAGAA GACCTTGCTA TAATGGAAAG GAATCTGGAA 
GAAGTCTCCA CTATAATAGA TGCTATCTTT GGCACAGGAT TAAACAGGAC TGTAGGGGGC 
ATGCAGTCCT ACATGATTTC TCTTATAAAT AGAACTATGA AGTATACAAT CTCTGTCGAT 
ATTCCCTCAG GACTTGATGG AGATTCCGGT AGAAATTGGG GAGAAGTCGT AGATAGTGAC 
CTTATCATTT CTATGCAAAT AATGAAAAGG GGCGTCTACG AAAAGAGTCA CTTTAAGGAT 
AAGTGCATAG TAGAGGATAT AGGCATACCA CAAAAGGCGA TTAGAGCGAT TTTGTAA
 
Protein sequence
MLVVDSKTMK KIDQYAIDVL KVPSICLVER AALAVIKNIN LEKRTSFAIV VGVGNNGADG 
LAIARNLLAM GKYVEIYIVG DLTKQSQDFK LNLDSCKRLT DKIFEPKSIE DLAIMERNLE 
EVSTIIDAIF GTGLNRTVGG MQSYMISLIN RTMKYTISVD IPSGLDGDSG RNWGEVVDSD 
LIISMQIMKR GVYEKSHFKD KCIVEDIGIP QKAIRAIL