Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0502 |
Symbol | |
ID | 8397278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 574066 |
End bp | 574866 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644994860 |
Product | ABC-3 protein |
Protein accession | YP_003152270 |
Protein GI | 257066014 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.24311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGAAT TTGCCTTTAT GAGAAAGGCC CTACTTTCGG GATTTCTCTT ATCTATAATG ATTCCTCTAA TAGGGATTGT CATGGTCAAT AGAAAAACTT CAATGATAGG TGATGCCCTA TCCCATACGG CCCTTACAGG AGTAGCCATG GGACTAATCT TAGGTTTTGA TCCGCTCTTA GGATCGGCTA TTGTATGTGT AATAGCTGCC TTCCTTATAG AATTTATTAG GAAAAAGCTC CCTCAATACG GGGATATGGC AACAGCTGTT ATCATGAGTA CAGGACTCGG AATTGCAGCG ATTCTTTCTG ATTTCGCTCC GGGAGGTAAT TCTTTTGAAT CTTATCTATT CGGTTCGATT TCATCAGTTA CAAGTGCGGA TGTATTAAAC ACTAGCCTTA TTTTTATCTT GGTTCTTGCC CTATGCATCA GTAGATACTC AGCACTTTTG GCAATTTCGA TAGATAATAA TACAGCTAGG CTTGCAGGAG TTAAGGTAAA GATAATAGAT ATGATATTTA CTTTCCTATC AGCTGTGACA ATTGCCCTTG CGGTTAAAAT TATAGGAGCC TTGATGGTTA CAAGCTTAAT AGTTCTTCCA GTAGCAACTA GTTTGATTAT ATCTAGATCT TATAAGCAAA CTTTCTTTGT AACTATAATC CTTGGAATAA TATATATGAT GGCAGGAATC ATTCTTTCCT TTCATTTCGA TATCAAACCA GGAGGAGCTA TTGTAGTAAA TGCAGTTATT GGAATGTTAA TTTTTGCCTT GTATAAGAAA ATGAGAAAAA CTAAAGCATA A
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Protein sequence | MLEFAFMRKA LLSGFLLSIM IPLIGIVMVN RKTSMIGDAL SHTALTGVAM GLILGFDPLL GSAIVCVIAA FLIEFIRKKL PQYGDMATAV IMSTGLGIAA ILSDFAPGGN SFESYLFGSI SSVTSADVLN TSLIFILVLA LCISRYSALL AISIDNNTAR LAGVKVKIID MIFTFLSAVT IALAVKIIGA LMVTSLIVLP VATSLIISRS YKQTFFVTII LGIIYMMAGI ILSFHFDIKP GGAIVVNAVI GMLIFALYKK MRKTKA
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