Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0495 |
Symbol | |
ID | 8397271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 567964 |
End bp | 568962 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644994853 |
Product | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin |
Protein accession | YP_003152263 |
Protein GI | 257066007 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1876] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.798346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTAACA GAGGTATCAG AGAATTAAAG AGAAAAAAGA GAAGACAAGC GAGAAAAAGA AGAAAAAAGT TCCTACTCAC AAGCCTTGCG GCCCTAGCCC TAGTTTTGGG AACAAAGTTT CTTAAAAACA CTGAAGAAGA ATTTATAATC CAAAGGCCGG CTGAGTATAG GCAAGCCCAG GCAGCTGATG ATGGAGAAGA AGACAAAGAA AAAAAGATAA ATGGAGATAA AATCCACATA GCTACCCAAG CTGGATTTAA GGATATAGCA ATAGATGAAG ATAAGAAAAT TGCTGATGAT AAGTATGAGG ATAATCTAGT AGAATACGTA AGATGTGTCA AGACCCAGTA CGCCTACCAA TATCCAAATG ATTATTCCAA GACAGAAAAG TTCATAAAAG AAGGAGATTA TGTCGCCTAT TATGGTACTG AAAATGGTTT TTCAAAAATC AAAATGGACG ACAGCTTTTA CTATGTCAAT AAGTTTGGCC TAGAAAAGTT AGACCCTGAA GCAAATATCA AAGTTGTAAA TGGAATTAGT TATGTAAGCG AGGCCTATCC TTTGCCAAGT GATTTTAATC CTGGCCTAGA TAAGACCGCC ATGCGTGCCT TCGAGACCAT GCGCCAAGAT ATGGAAAGAG AAGGCCTTAG TATCAAGATT GCCTCTGACT ATAGGGATTA TGATCTTGAA AGAAAGATGA AAGATGCAGG AGAAGTAGAT AGCGAAAATC CAGGCACGAG CGAGCATCAA TTAGGCCAAG CCTTTGACTT TTTTACAGAA GGAAGCAAAT ACAGCGATAA GTTCGCTACT ACAAAAGAGT ACAAGTGGCT TTGTGAAAAT GCTTACAAAT ATGGTTTCAT AGAAAGATAC CCTGAAGACA AAGAGGATAG CACAAACCAC AGACCTATGC CATGGCACTT CAGATTCCTT GGAGTAGAAA ACGCCAAAGA AATCTATGAA AATGATTTAA GCCTTGAAGA GTATTTGAAG ATTAATTGA
|
Protein sequence | MSNRGIRELK RKKRRQARKR RKKFLLTSLA ALALVLGTKF LKNTEEEFII QRPAEYRQAQ AADDGEEDKE KKINGDKIHI ATQAGFKDIA IDEDKKIADD KYEDNLVEYV RCVKTQYAYQ YPNDYSKTEK FIKEGDYVAY YGTENGFSKI KMDDSFYYVN KFGLEKLDPE ANIKVVNGIS YVSEAYPLPS DFNPGLDKTA MRAFETMRQD MEREGLSIKI ASDYRDYDLE RKMKDAGEVD SENPGTSEHQ LGQAFDFFTE GSKYSDKFAT TKEYKWLCEN AYKYGFIERY PEDKEDSTNH RPMPWHFRFL GVENAKEIYE NDLSLEEYLK IN
|
| |