Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0411 |
Symbol | |
ID | 8397185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 466894 |
End bp | 468102 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644994769 |
Product | protein of unknown function UPF0118 |
Protein accession | YP_003152181 |
Protein GI | 257065925 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAC TAGATAAAAA ATCTAGAGAT TTATTAAAGG TTATTTGTTA TGGTATTATA TTATTTTTTG CCTTCTGGTA TTTTCCAGTT ATAAAAGATG GCCTCGCTAG GGTAGTTGGA GTCTTCCAGC CCTTTATCAT AGGAGGGATG ATTGCTTATC TAGTGAGTAT TCCTATGAAT TATTTTGAAA GAAAACTCAG AGCAAACTTC CCAGATAAGA AGTATAGGAA AAGGATAAGT GCATTATCTT TATTTGTATC ATGGGTACTT ATTATATGTT GCTTGATTTT ATTTTTAAAC ATCCTGATTC CAAGGATTGT TGCAGTCATC TTCTCCTTCT TCAATAGGTG GCCTGAGTTT ATTAGAGAAA CTTACGAGAC TTTGAACAGT CACGCTATAA CAAGGCCTTA TGCTGATAAG TTCTACGAAT ATGTGAATTC ATTCGGCTGG TATGAGGTGA GAAATGCTGT AATGAATTTT ATAACAGACA AGAAGACTAA TCTTTTTAGT CTAACTACAG GAGTCCTTAA CTCAGTAAGC TCTTCTTTGA TTACGATCTT TACGATAATT GTCTTTTCGA TTTTTGTCCT AATCTATAAG GATATGCTAA AGACAAATGG AACAAGGATT ATCTATGCTT TGATGAGTGA AAAGAAGGCG GATTATATAA ACAAGGTCCT ATCCCTATCT TATAACACCT TCAAGGATTA TATTTTCTCA AGGCTTATAG CTGTGGTTAC CCTATCAGCC TTAACCTTTG TGGGCATGTT TATTATGGGC ATCCCCAACG CTGGGGTCAT CTCGCTTTTT GTGGGAGTGT CAGATTTAAT TCCAATCTTT GGTCCCATAG TTGGTGCAGG TCTATCGGCA GTCATTATAT TTTTGGAAAG TCCAGTCAAG GCTTTAATTT TCCTAATCTA TGATGTAATA ATCCAGCAAA TCCAAGAAAA TATTATCTAT CCTGCCATAG CTGGAGAGAA GATTGGCCTT CCTGCAGTAT GGGTCCTTGC AGCAATTACA ATAGGTGGGT CGCTCTTTGG CATATGGGGT ATGCTTATCG GTATTCCTGT AGCTTCTGTA ATATATACGC TCTTTCATGA GTTTATTGAT AATAAGCTTA AGGCTAAGGA AATAACAGAT AAGATGATCG AAGAAAAGAA GAATGAGAAA TACACCATGG AGGATATAGA TATTCATGAA GCTCAGTAG
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Protein sequence | MEKLDKKSRD LLKVICYGII LFFAFWYFPV IKDGLARVVG VFQPFIIGGM IAYLVSIPMN YFERKLRANF PDKKYRKRIS ALSLFVSWVL IICCLILFLN ILIPRIVAVI FSFFNRWPEF IRETYETLNS HAITRPYADK FYEYVNSFGW YEVRNAVMNF ITDKKTNLFS LTTGVLNSVS SSLITIFTII VFSIFVLIYK DMLKTNGTRI IYALMSEKKA DYINKVLSLS YNTFKDYIFS RLIAVVTLSA LTFVGMFIMG IPNAGVISLF VGVSDLIPIF GPIVGAGLSA VIIFLESPVK ALIFLIYDVI IQQIQENIIY PAIAGEKIGL PAVWVLAAIT IGGSLFGIWG MLIGIPVASV IYTLFHEFID NKLKAKEITD KMIEEKKNEK YTMEDIDIHE AQ
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